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JinLabBioinfo / HiCorr

HiCorr: a Hi-C data bias-correction pipeline
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reference genome issue #7

Open LeeYEAH2 opened 1 year ago

LeeYEAH2 commented 1 year ago

Hi，I see you only provide mm10&hg19 reference genome build. if I want to use HiCorr on other species, would that do? are there any special requirements for the reference genome build?

LeeYEAH2 commented 1 year ago

more clearly, I mean the requirements for the genome, I've already seen the generate_reference_files.md there.

wangzhaohui-001 commented 3 months ago

Hi, i want know if you slove this issue. I want to use HiCorr on other species

LeeYEAH2 commented 2 months ago

Hi, i want know if you slove this issue. I want to use HiCorr on other species

@wangzhaohui-001 sry for the late reply. actually nothing special due to null response from the author. Just prepare your best genome version of your intended species. AND follow the generate_reference_files.md they provided in the document directory. Thus u can prepare several files required for the main process. THAT would do for me, if u encounter any problem, I would may be of some help.