What steps will reproduce the problem?
1.create a set of references
2.pick a few fasta records from the references and save into separate fasta
file. This file will serve as db2 (= unclustered).
3. Add a smaller fasta record on top of db2
The expected output is that all sequences (except maybe the unreleted first
record) are added to the existing clusters. Instead, none of them is added.
CD-HIT version 4.6 (built on Nov 28 2012) on linux.
Possible fix (see attached patch)
Original issue reported on code.google.com by logghe.m...@gmail.com on 15 May 2013 at 2:49
Original issue reported on code.google.com by
logghe.m...@gmail.com
on 15 May 2013 at 2:49Attachments: