Miniscope video with 24 bits per pixel

JinghaoLu / MIN1PIPE

A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.

GNU General Public License v3.0

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Miniscope video with 24 bits per pixel #11

Closed KarolinaFarrell closed 5 years ago

KarolinaFarrell commented 5 years ago

I've tried running the code on my Miniscope imaging video (.avi), the code gets stuck in data_cat.m when trying to use zeros because the VideoReader gets 24 bits per pixel and therefore dtype becomes 'uint24'. How can I get around this without corrupting my data? Thanks!

JinghaoLu commented 5 years ago

Hi Karolina,

I am not sure what the problem is without more information. If it is possible, do you mind sending a small piece of demo video so that I can try reproducing the problem and finding a solution?

Jinghao

KarolinaFarrell commented 5 years ago

I've sent it to min1pipe2018@gmail.com. Thanks!