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JinghaoLu / MIN1PIPE

A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
GNU General Public License v3.0
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Index exceeds the number of array elements (345465856). #19

Closed myhuyong closed 5 years ago

myhuyong commented 5 years ago

Hi Jinghao Lu, Recently, when I test my avi video from miniscope in MATLAB R2019a, I get an error message "Index exceeds the number of array elements (345465856)". Do you have any suggestion to fix this? Thank you. Yong

JinghaoLu commented 5 years ago

Hi Yong,

Please provide the detailed error message, including at which step and function it comes from.

Thanks

myhuyong commented 5 years ago

Hi Jinghao Lu, Following is the error message. Thank you! Yong

Begin collecting datasets info Done collecting datasets info, time: 0.48848 Begin data cat Index exceeds the number of array elements (360988160).

Error in data_cat (line 187) frame = flipud(reshape(d_raw(stt(f_idx(ii)) + 1: stt(f_idx(ii)) + ndframe), pixwo, pixho)');

Error in min1pipe (line 83) [m, filename_raw, imaxn, imeanf, pixh, pixw, nf] = data_cat(path_name, file_base{i}, file_fmt{i}, Fsi, Fsi_new, spatialr);

Error in demo_min1pipe (line 14) [fname, frawname, fregname] = min1pipe(Fsi, Fsi_new, spatialr, se, ismc, flag);

Error in run (line 91) evalin('caller', strcat(script, ';'));

JinghaoLu commented 5 years ago

Thanks for bringing this up. It is due to a recent bug after fixing the avi reading index issue, which is now corrected and updated in the git repo.