JinghaoLu / MIN1PIPE

A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
GNU General Public License v3.0
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Error with manual seed selection (and possible solution) #56

Closed BrainofZedZed closed 3 years ago

BrainofZedZed commented 3 years ago

Hello,

Firstly, thank you Jinghao for creating and maintaining this helpful tool for the community. I wanted to document an error I've encountered with manual seed selection as well as a solution that's worked for me.

The error is: `Unrecognized function or variable 'm'

Error in iter_seeds_select (line 127)

[...out vars...] = manual_seeds_select(m, Fsi_new, sz);`

'm' is undefined in that function, however 'm_in' and 'm_temp' are defined. Changing the argument from 'm' to 'm_in' seems to solve the issue, though I'm not sure what the differences between m_in and m_temp are.

Hope this is helpful.

Best, Zach

BrainofZedZed commented 3 years ago

To followup on this, I see that in commits since the v3 alpha release, you've already fixed the issue.. Nevermind!