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Jingnan-Jia / segmentation_metrics

A package to compute medical segmentation metrics.
MIT License
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Evaluation metric 3D or 2D based segmentation #27

Closed Merom99 closed 2 months ago

Merom99 commented 4 months ago

Hi,

If I used 2D configuration for a volumetric image, is the evaluation metric computed for the 3D volume or per 2D slices and then aggregating?

Thanks

Jingnan-Jia commented 3 months ago

@Merom99 Hi Merom99, can you clarify what do you mean for "used 2D configuration for a volumetric image"? Currently, the package does not aggregate 2D slices to 3D. If the images are a batch of 2D/3D images, then the results would be the metrics of all 2D/3D images.