JinmiaoChenLab / cytofkit

cytofkit: an integrated flow/mass cytometry data analysis pipeline
http://jinmiaochenlab.github.io/cytofkit/
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Cannot regroup samples in ShinyAPP #16

Open ddelalca opened 6 years ago

ddelalca commented 6 years ago

Hello, I recently upgraded to version 1.10 and I am no longer able to regroup samples in the ShinyAPP. When I try, the GUI greys out, which is something that usually happens when I close R while running the GUI. I'm not sure if this is at all due to the way that I'm implementing cytofkit. I have some code that I wrote that allows me to use cytofkit to cluster the Visne data that I export from cytobank. After I do the clustering, I visualize the data within the shinyAPP. I've used the code in previous versions of cytofkit and it worked fine. With the newest version, everything seems to work fine, except for the fact that I can't regroup samples in the GUI. I'm running on windows and using R version 3.4.2 . I can share the code if necessary.

MattMyint commented 6 years ago

Hi!

Does cytofkit provide an error message when you try to regroup samples?

EDIT: Also, if possible, could you share the steps you took that led to the error? I've tried replicating the error on my own with test data of 3 samples, and managed to regroup them