cytofkit does not generate new FCS files in results directory

JinmiaoChenLab / cytofkit

cytofkit: an integrated flow/mass cytometry data analysis pipeline

http://jinmiaochenlab.github.io/cytofkit/

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cytofkit does not generate new FCS files in results directory #46

Open alimcdonnell opened 5 years ago

alimcdonnell commented 5 years ago

Hi,

I have recently updated to R version 3.5.1 and Cytofkit version 1.12.0 and since the updates any analysis I run in the cytofkit GUI fails to output new FCS files in the results directory. Any help would be appreciated.

ta Ali

SamGG commented 5 years ago

Hi, Install latest version of flowCore (1.47.5) from github and report if the problem is still there.

install.packages("devtools")
devtools::install_github("RGLab/flowCore", ref = "trunk")