JoRussell-IDM / updated_infection_and_immunity

malaria_two_pt_oh
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Primary peak parasitemia #3

Open JoRussell-IDM opened 5 years ago

JoRussell-IDM commented 5 years ago

Individuals stratified by individual properties (age, exposure, strain diversity) shall experience first wave primary peak parasitemiae (PPP) statistically to reference distributions of PPP.

Structurally, this requirement is satisfied if individuals upon receiving an infection draw a first_peak_value from the distribution specified by a mu and a sigma in the config, and that value is effectively clamped between the specified upper and lower bounds in InfectionMalaria2::get_infection()

Verification Method: KS test showing statistically similar PPP across individual strata.