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JoachimGoedhart / VolcaNoseR

Shiny app for making and annotating Volcano plots
https://huygens.science.uva.nl/VolcaNoseR/
GNU General Public License v3.0
20 stars 7 forks source link

colours are gone #10

Closed amitpande74 closed 3 years ago

amitpande74 commented 3 years ago

Dear Joachim,

The webapp as well as the standalone does not display colours anymore. edgeR_DLX5_high.txt attached is the input file. Am I doing something wrong. HELP. regards, Amit.

JoachimGoedhart commented 3 years ago

It seems that your data does not have a column with -log10(p-value) data. When added (calculated from the pvalue), I get a decent Volcano Plot. VolcaNoseR_2021-05-18 11_04_35

Updated data: edgeR_DLX5_high.csv

amitpande74 commented 3 years ago

Hi@Joachim, Thanks a lot for pointing it out.