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John-P / wsic

Whole Slide image (WSI) conversion for brightfield histology images
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⬆️ Bump zarr from 2.14.2 to 2.15.0 #132

Closed dependabot[bot] closed 1 year ago

dependabot[bot] commented 1 year ago

Bumps zarr from 2.14.2 to 2.15.0.

Release notes

Sourced from zarr's releases.

v2.15.0

See release notes https://zarr.readthedocs.io/en/latest/release.html#release-2-15-0

What's Changed

New Contributors

... (truncated)

Changelog

Sourced from zarr's changelog.

2.15.0

Enhancements


* Implement more extensive fallback of getitem/setitem for orthogonal indexing.
  By :user:`Andreas Albert <AndreasAlbertQC>` :issue:`1029`.

    

  • 

    Getitems supports meta_array.
By :user:Mads R. B. Kristensen &lt;madsbk&gt; :issue:1131.
    

    • 

  • 

    open_array() now takes the meta_array argument.
By :user:Mads R. B. Kristensen &lt;madsbk&gt; :issue:1396.
    

    • 



Maintenance



* Remove ``codecov`` from GitHub actions.
  By :user:`John A. Kirkham &lt;jakirkham&gt;` :issue:`1391`.

* Replace ``np.product`` with ``np.prod`` due to deprecation.
  By :user:`James Bourbeau &lt;jrbourbeau&gt;` :issue:`1405`.

* Activate Py 3.11 builds.
  By :user:`Joe Hamman &lt;jhamman&gt;` :issue:`1415`.

Documentation
</code></pre>
<ul>
<li>Add API reference for V3 Implementation in the docs.
By :user:<code>Sanket Verma &lt;MSanKeys963&gt;</code> :issue:<code>1345</code>.</li>
</ul>
<p>Bug fixes</p>
<pre><code>
* Fix the conda-forge error. Read :issue:`1347` for detailed info.
  By :user:`Josh Moore &lt;joshmoore&gt;` :issue:`1364` and :issue:`1367`.

* Fix ``ReadOnlyError`` when opening V3 store via fsspec reference file system.
  By :user:`Joe Hamman &lt;jhamman&gt;` :issue:`1383`.

* Fix ``normalize_fill_value`` for structured arrays.
  By :user:`Alan Du &lt;alanhdu&gt;` :issue:`1397`.

.. _release_2.14.2:
</code></pre>
</blockquote>
</details>
<details>
<summary>Commits</summary>

<ul>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/5d7e287d23145b1f0f355b14e9111aa81c79cd22"><code>5d7e287</code></a> 2.15.0: Remove pre-release warning (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1419">#1419</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/4132f360616a4c8bfa3dd4e979a4793c5d84cdfc"><code>4132f36</code></a> Fix typo introduced by dcce26e (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1420">#1420</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/3649b9b23d87cfd7141045bdf8684ecc1cdfbd90"><code>3649b9b</code></a> <code>open_array()</code>: adding the <code>meta_array</code> argument (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1396">#1396</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/cc16d8c8cbafc2dd736f11b9c1ad28a58529e40d"><code>cc16d8c</code></a> chore: update pre-commit hooks (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1416">#1416</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/4fe109175845b4bbcb243583fc63e2548a53033e"><code>4fe1091</code></a> Bump redis from 4.5.4 to 4.5.5 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1413">#1413</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/0891bf9c8049631000dab5934be77598c41c31f1"><code>0891bf9</code></a> test(ci): Run tests against python 3.11 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1415">#1415</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/e2ab17f03e2d4e5ceb1a0ba32a62019a4fb55721"><code>e2ab17f</code></a> Bump fsspec from 2023.4.0 to 2023.5.0 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1411">#1411</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/90da1f35526083d6d605511a75a85cd150bd8afd"><code>90da1f3</code></a> Bump redis from 4.5.3 to 4.5.4 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1380">#1380</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/43fdc3dde64972c1a08b3d6d5b71433a05a7a5c2"><code>43fdc3d</code></a> chore: update pre-commit hooks (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1366">#1366</a>)</li>
<li><a href="https://github.com/zarr-developers/zarr-python/commit/e1e290f0efe42444845c78c47d4b4db8f6907e96"><code>e1e290f</code></a> Bump lmdb from 1.4.0 to 1.4.1 (<a href="https://redirect.github.com/zarr-developers/zarr-python/issues/1384">#1384</a>)</li>
<li>Additional commits viewable in <a href="https://github.com/zarr-developers/zarr-python/compare/v2.14.2...v2.15.0">compare view</a></li>
</ul>
</details>

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codecov[bot] commented 1 year ago

Codecov Report

Merging #132 (02e3e9c) into dev (632955c) will not change coverage. The diff coverage is n/a.

@@           Coverage Diff           @@
##              dev     #132   +/-   ##
=======================================
  Coverage   87.50%   87.50%           
=======================================
  Files          15       15           
  Lines        2088     2088           
=======================================
  Hits         1827     1827           
  Misses        261      261

:mega: We’re building smart automated test selection to slash your CI/CD build times. Learn more

dependabot[bot] commented 1 year ago

Superseded by #140.