This PR renames the clusters attribute of PubtatorAnnotation to entities. Likewise, it renames PubtatorCluster --> PubtatorEntity. This is a breaking change and any code that depend on previous versions of this library will need to be updated. The motivation for the name change is that, "entities" is more commonly used than "clusters" and should be more immediately intuitive.
This PR renames the
clustersattribute ofPubtatorAnnotationtoentities. Likewise, it renamesPubtatorCluster-->PubtatorEntity. This is a breaking change and any code that depend on previous versions of this library will need to be updated. The motivation for the name change is that, "entities" is more commonly used than "clusters" and should be more immediately intuitive.Closes #45.