Sometimes, PubTator misses annotations that cause an alignment to fail. Ideally, we could extend PubTators annotation using another service, like scispacy. Assuming that scispacy at least occasionally catches annotations that are missed by PubTator, this would lead to less missed alignments and therefore more training data. It would also likely improve the quality of the alignments, as it should lead to less missed interactions and coreferent mentions.
Sometimes, PubTator misses annotations that cause an alignment to fail. Ideally, we could extend PubTators annotation using another service, like scispacy. Assuming that scispacy at least occasionally catches annotations that are missed by PubTator, this would lead to less missed alignments and therefore more training data. It would also likely improve the quality of the alignments, as it should lead to less missed interactions and coreferent mentions.