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JohnleeHIT / Brats2019

[BrainLes2019] Multi-step cascaded network for brain tumor segmentations (tensorflow)
https://arxiv.org/abs/1908.05887
MIT License
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Error occurs when data's brain region size lower than patch size #12

Open zwlshine opened 4 years ago

zwlshine commented 4 years ago

Hi, when do gen_map on validation dataset, some datas occurs error like this: image I found the reason is data's brain region is lower than patch size: image My pacth size is 96, how to fix this error? Thank you very much!

JohnleeHIT commented 4 years ago

Normally, the brain region should larger than 969696, i didn't meet that situation. However, we can still fix it by padding it which would hurt the accuracy i guess.