Open KarenUllrich opened 9 years ago
Hello Karen,
I didn't try the bleeding edge version of Theano, but the latest version on pip works.
Here is my pip3 freeze
relevant modules:
Theano==0.7.0rc2
theano-lstm==0.0.14
Cython==0.22
numpy==1.9.2
scipy==0.15.1
And if I check numpy's installation configuration as follows:
import numpy as np
np.__config__.show()
I get:
atlas_3_10_threads_info:
NOT AVAILABLE
blas_mkl_info:
NOT AVAILABLE
atlas_blas_info:
NOT AVAILABLE
mkl_info:
NOT AVAILABLE
atlas_3_10_blas_threads_info:
NOT AVAILABLE
lapack_mkl_info:
NOT AVAILABLE
lapack_opt_info:
extra_compile_args = ['-msse3', '-DAPPLE_ACCELERATE_SGEMV_PATCH']
define_macros = [('NO_ATLAS_INFO', 3)]
extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
atlas_blas_threads_info:
NOT AVAILABLE
atlas_threads_info:
NOT AVAILABLE
openblas_info:
NOT AVAILABLE
atlas_3_10_blas_info:
NOT AVAILABLE
atlas_info:
NOT AVAILABLE
openblas_lapack_info:
NOT AVAILABLE
blas_opt_info:
extra_compile_args = ['-msse3', '-DAPPLE_ACCELERATE_SGEMV_PATCH', '-I/System/Library/Frameworks/vecLib.framework/Headers']
define_macros = [('NO_ATLAS_INFO', 3)]
extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
atlas_3_10_info:
NOT AVAILABLE
Does that help narrow down the issue?
Hallo Jonathan,
I totally forgot about this issue, so sorry for the delayed reply.
At the end of the story, I couldnt really figure out where the error was comming from.
I could only locate that it has something to do with scipy. And that the pip-scipy version (or Github-scipy version) both work fine. However, the apt-get version causes numerical errors. Honestly, I didn't think it was worth investing much time to investigate this issue any further.
Cheers, Karen
Got it. Hope it works out! Best, Jonathan
I've run into the same problem Jonathan, I was wondering if you installed numpy via the PyPy module? My installs -- via Git, and via the Debian repo on two different machines -- aren't configured in the same way (no lapack or blas support despite being installed..), and I get the errors reported in the OP.. Thanks, \Michael
Hello, I ran into the same error with:
How can we solve this ? Thanks
Win7 64bits
scipy==0.16.0
Cython==0.22.1
numpy==1.9.2
Theano==0.7.0
theano-lstm==0.0.15
lapack_opt_info: libraries = ['mkl_lapack95_lp64', 'mkl_blas95_lp64', 'mkl_intel_lp64', 'mkl_intel_thread', 'mkl_core', 'libiomp5md', 'libifportmd', 'mkl_lapack95_lp64', 'mkl_blas95_lp64', 'mkl_intel_lp64', 'mkl_intel_thread', 'mkl_core', 'libiomp5md', 'libifportmd'] library_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/lib/intel64'] define_macros = [('SCIPY_MKL_H', None)] include_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/include'] blas_opt_info: libraries = ['mkl_lapack95_lp64', 'mkl_blas95_lp64', 'mkl_intel_lp64', 'mkl_intel_thread', 'mkl_core', 'libiomp5md', 'libifportmd'] library_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/lib/intel64'] define_macros = [('SCIPY_MKL_H', None)] include_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/include'] openblas_lapack_info: NOT AVAILABLE lapack_mkl_info: libraries = ['mkl_lapack95_lp64', 'mkl_blas95_lp64', 'mkl_intel_lp64', 'mkl_intel_thread', 'mkl_core', 'libiomp5md', 'libifportmd', 'mkl_lapack95_lp64', 'mkl_blas95_lp64', 'mkl_intel_lp64', 'mkl_intel_thread', 'mkl_core', 'libiomp5md', 'libifportmd'] library_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/lib/intel64'] define_macros = [('SCIPY_MKL_H', None)] include_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/include'] blas_mkl_info: libraries = ['mkl_lapack95_lp64', 'mkl_blas95_lp64', 'mkl_intel_lp64', 'mkl_intel_thread', 'mkl_core', 'libiomp5md', 'libifportmd'] library_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/lib/intel64'] define_macros = [('SCIPY_MKL_H', None)] include_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/include'] mkl_info: libraries = ['mkl_lapack95_lp64', 'mkl_blas95_lp64', 'mkl_intel_lp64', 'mkl_intel_thread', 'mkl_core', 'libiomp5md', 'libifportmd'] library_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/lib/intel64'] define_macros = [('SCIPY_MKL_H', None)] include_dirs = ['C:/Program Files (x86)/Intel/Composer XE/mkl/include']
Hallo Jonathan,
I was exited to test your library. I wanted to test the lib after installing by running the Tutorial code. However, I get several
from my theano bleeding-edge Version and strangely after some compilation the error rises rapidly. The complete output follows:
Could you provide what lib versions you are using exactly (i.e. theano, numpy, scipy, blas, ect) so that I can track what might go wrong for me. Thank you very much for help.
Karen