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JonathanShor / DoubletDetection

Doublet detection in single-cell RNA-seq data.
https://doubletdetection.readthedocs.io/en/stable/
MIT License
81 stars 23 forks source link

Removing default thresholds #112

Closed adamgayoso closed 3 years ago

adamgayoso commented 6 years ago

This shouldn't be an optional parameter. Experimenters should create the threshold plot and choose their own thresholds.

adamgayoso commented 5 years ago

Alternatively, we can leave default thresholds, but print a mean statement about exploring the threshold space.

adamgayoso commented 5 years ago

I'm not sure we should do this any longer.

JonathanShor commented 5 years ago

Not even the mean statement?