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JonathanShor / DoubletDetection

Doublet detection in single-cell RNA-seq data.
https://doubletdetection.readthedocs.io/en/stable/
MIT License
81 stars 23 forks source link

Neighbor graph should only be calculated when not using PhenoGraph #130

Closed adamgayoso closed 5 years ago

adamgayoso commented 5 years ago

This line should be moved to the else statement of use_phenograph is True

https://github.com/JonathanShor/DoubletDetection/blob/267f5107b387822b43e3d23106ccf261ced9a55d/doubletdetection/doubletdetection.py#L349