move to poetry for dist, remove excess code, use pip installable pheno - Githubissues

JonathanShor / DoubletDetection

Doublet detection in single-cell RNA-seq data.

https://doubletdetection.readthedocs.io/en/stable/

MIT License

81 stars 23 forks source link

move to poetry for dist, remove excess code, use pip installable pheno #136

Closed adamgayoso closed 3 years ago

adamgayoso commented 3 years ago

Allow distribution to PyPI with poetry
Add doublet_score function which has been used for benchmarking in other papers
Add basic testing
Remove data loading functions (mature software like scanpy handles this now)
Remove umap plot function (again defer to scanpy)
Refresh tutorial

adamgayoso commented 3 years ago

@JonathanShor this could probably be merged into a dev-3.0 branch