search

JosephCrispell / homoplasyFinder

A tool to identify and annotate homoplasies on a phylogeny and sequence alignment
GNU General Public License v3.0
19 stars 3 forks source link

Problem using readAnnotatedTree function #23

Open BioinfoNovice opened 1 year ago

BioinfoNovice commented 1 year ago

Hi,

First of all, thank you very much for the package. I'm trying to use it with my data. I was able to generate the results table. However, when I executed the 'readAnnotatedTree' function, I had an error message:

Error in FUN(X[[i]], ...) : attempt to set index -57/52 in SET_STRING_ELT

What does this mean? What could be the cause of this error?

JosephCrispell commented 1 year ago

Hi!

Sorry for my extremely slow reply and thanks for using HomoplasyFinder! Would you be able to share the annotated tree and results files with me and I'll see if I can replicate?

Also can you share the exact R code running when you get the error?

Thanks!

Joe