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Jtrachsel / gifrop

Genomic Islands From Roary Pangenomes
GNU General Public License v2.0
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Error reading fastas #4

Closed Jtrachsel closed 2 years ago

Jtrachsel commented 3 years ago

[1] "loading packages" [1] "done loading packages" [1] "reading in gffs..." Joining, by = c("seqid", "locus_tag") [1] "reading in fastas..." Error in .Call2("new_input_filexp", filepath, PACKAGE = "XVector") : cannot open file './gifrop_out/sequence_data/GCA_007404245.1_PDT000452765.1_genomic.fna' Calls: sapply ... lapply -> lapply -> FUN -> new_input_filexp -> .Call2 Execution halted

Jtrachsel commented 2 years ago

I think this was an issue with that particular file.