Current behaviour is to output domain predictions based on 0-indexed sequential residue position in the PDB file.
Better would be 1-indexed to match AlphaFold structures.
Best would be indexing that matches the author numbers in the provided PDB file.
Current behaviour is to output domain predictions based on 0-indexed sequential residue position in the PDB file. Better would be 1-indexed to match AlphaFold structures. Best would be indexing that matches the author numbers in the provided PDB file.