Add option to remove low PLDDT residues from domain assignments on AlphaFold structures

JudeWells / chainsaw

MIT License

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Add option to remove low PLDDT residues from domain assignments on AlphaFold structures #29

Open JudeWells opened 10 months ago

JudeWells commented 10 months ago

Add some functionality to the post-processing which modifies domain assignments to remove residues which have low PLDDT (which is the b-factor column of PDB files generated by AlphaFold).

JudeWells commented 10 months ago

I'm working on this currently

alex-hh commented 10 months ago

in case of any use i did some refactoring to support this here (was intended for unidoc but also compatible with chainsaw): https://github.com/JudeWells/chainsaw/compare/unidoc