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A Julia machine learning framework
https://juliaai.github.io/MLJ.jl/
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OpenML integration: Kmeans is not fitting #580

Closed drcxcruz closed 4 years ago

drcxcruz commented 4 years ago

Describe the bug The fit!(Kmeans) is generating an error. Please see code and error below.

To Reproduce using MLJ, DataFrames, Queryverse, CategoricalArrays, PrettyPrinting @load KMeans pkg = Clustering @load PCA pkg = MultivariateStats @load SVC pkg = LIBSVM @load RandomForestClassifier pkg=DecisionTree

rowtable = OpenML.load(1590) dfAdult = DataFrame(rowtable)

dfAdultScientific = copy(dfAdult) coerce!(dfAdultScientific, autotype(dfAdultScientific, :string_to_multiclass))

@pipeline SPCA(std = Standardizer(), pca = PCA(), hot = OneHotEncoder(), km = KMeans(k=4))

X = select(dfAdultScientific, Not([:class])) pipe = SPCA() Kmeans = machine(pipe, X) fit!(Kmeans)

┌ Info: Training Machine{SPCA} @ 1…40. └ @ MLJBase C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\machines.jl:187 ┌ Info: Training NodalMachine{Standardizer} @ 2…73. └ @ MLJBase C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\machines.jl:187 ┌ Warning: No features left to standarize. └ @ MLJModels C:\Users\BCP.julia\packages\MLJModels\i4XcU\src\builtins\Transformers.jl:464 ┌ Info: Training NodalMachine{PCA} @ 7…04. └ @ MLJBase C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\machines.jl:187 MethodError: no method matching fit(::Type{MultivariateStats.PCA}, ::Array{Any,2}; method=:auto, pratio=0.99, maxoutdim=15, mean=nothing) Closest candidates are: fit(!Matched::Type{StatsBase.Histogram}, ::Any...; kwargs...) at C:\Users\BCP.julia\packages\StatsBase\unDUx\src\hist.jl:383 fit(!Matched::StatsBase.StatisticalModel, ::Any...) at C:\Users\BCP.julia\packages\StatsBase\unDUx\src\statmodels.jl:152 got unsupported keyword arguments "method", "pratio", "maxoutdim", "mean" fit(!Matched::Type{D}, ::Any) where D<:Distributions.Distribution at C:\Users\BCP.julia\packages\Distributions\RAeyY\src\genericfit.jl:33 got unsupported keyword arguments "method", "pratio", "maxoutdim", "mean" ...

Stacktrace: [1] fit(::PCA, ::Int64, ::DataFrame) at C:\Users\BCP.julia\packages\MLJModels\i4XcU\src\MultivariateStats.jl:112 [2] fit!(::NodalMachine{PCA}; rows::Function, verbosity::Int64, force::Bool) at C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\machines.jl:188 [3] fit!(::Node{NodalMachine{KMeans}}; rows::Nothing, verbosity::Int64, force::Bool) at C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\composition\networks.jl:339 [4] (::MLJBase.var"#_fit#138"{Node{NodalMachine{KMeans}},Tuple{Standardizer,PCA,OneHotEncoder,KMeans},MLJBase.Source{:input}})(::SPCA, ::Int64, ::DataFrame) at C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\composition\composites.jl:264 [5] fit(::SPCA, ::Int64, ::DataFrame) at C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\composition\composites.jl:409 [6] fit!(::Machine{SPCA}; rows::Nothing, verbosity::Int64, force::Bool) at C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\machines.jl:188 [7] fit!(::Machine{SPCA}) at C:\Users\BCP.julia\packages\MLJBase\O5b6j\src\machines.jl:151

Expected behavior

Additional context Thanks for your time.

Versions Julia 1.4.2

(@v1.4) pkg> status Status C:\Users\BCP\.julia\environments\v1.4\Project.toml [336ed68f] CSV v0.6.1 [324d7699] CategoricalArrays v0.7.7 [aaaa29a8] Clustering v0.14.1 [861a8166] Combinatorics v1.0.2 [d58978e5] Dagger v0.8.0 [a93c6f00] DataFrames v0.20.2 [7806a523] DecisionTree v0.10.5 [31c24e10] Distributions v0.23.4 [38e38edf] GLM v1.3.9 [0e44f5e4] Hwloc v1.0.3 [09f84164] HypothesisTests v0.10.0 [7073ff75] IJulia v1.21.2 [b1bec4e5] LIBSVM v0.4.0 [add582a8] MLJ v0.11.2 [a7f614a8] MLJBase v0.13.5 [e80e1ace] MLJModelInterface v0.2.7 [d491faf4] MLJModels v0.9.10 [e1d29d7a] Missings v0.4.3 [6f286f6a] MultivariateStats v0.7.0 [5fb14364] OhMyREPL v0.5.5 [54e16d92] PrettyPrinting v0.2.0 [1a8c2f83] Query v0.12.2 [612083be] Queryverse v0.6.1 [8523bd24] ShapML v0.3.0 [2913bbd2] StatsBase v0.33.0 [bd369af6] Tables v1.0.4 [112f6efa] VegaLite v2.2.0 [009559a3] XGBoost v1.1.1

ablaom commented 4 years ago

PCA is going to require a table of continuous features. You have your one-hot encoder after PCA in the pipeline. So your non-continuous features are going to crash the PCA.

I expect you meant to apply PCA after one hot encoding, no?

drcxcruz commented 4 years ago

hi

Yes, you are right, thank you. the following worked fine.

@pipeline SPCA(std = Standardizer(), hot = OneHotEncoder(), pca = PCA(), km = KMeans(k=4))

Some observations.

  1. the previous version of the pipe where the one hot encoder was after the PCA worked in my old lab, Perhaps, things work differently in the newest version of MLJ. For example, assignments = report(Kmeans).reports[1].assignments used to work in the past but not anymore. No worries, I will modify my code accordingly

  2. Is there any way to make the error message more clear so we bother you less? :)

  3. report(Kmeans).report_given_machine OrderedCollections.LittleDict{Any,Any,Array{Any,1},Array{Any,1}} with 4 entries: NodalMachine{KMeans}… => (assignments = [2, 1, 3, 2, 1, 2, 2, 1, 3, 1 … … NodalMachine{PCA} @ … => (indim = 108, outdim = 1, mean = [38.6436, 0.057… NodalMachine{OneHotE… => (features_to_be_encoded = [:education, :race, :s… NodalMachine{Standar… => (features_fit = Symbol[],)

how do we read the assignments now? I am having trouble understanding the above data structure :)

ablaom commented 4 years ago

Thanks for the feedback - appreciate it!

  1. Not sure I can explain without more detail

  2. Yeah, this is a good point but trickier than you might think, but I've opened this: https://github.com/alan-turing-institute/MLJBase.jl/issues/358

  3. MLJBase 0.12.0, to be released in the next few hours, is going to make accessing nested reports and fitted parameters easier. The syntax for @pipeline is also being changed (the old one will give deprecation warnings). Here's an example of how access will look:

@load LogisticClassifier pkg=MLJLinearModels
X, y = @load_crabs;
pipe = @pipeline Standardizer LogisticClassifier
mach = machine(pipe, X, y) |> fit!

julia> fitted_params(mach).logistic_classifier
(classes = CategoricalArrays.CategoricalValue{String,UInt32}["B", "O"],
 coefs = Pair{Symbol,Float64}[:FL => 3.7095037897680405, :RW => 0.1135739140854546, :CL => -1.6036892745322038, :CW => -4.415667573486482, :BD => 3.238476051092471],
 intercept = 0.0883301599726305,)

Similar for nested reports.

drcxcruz commented 4 years ago

hi,

was the new version of MLJ released to the public?

(@v1.4) pkg> update MLJ Updating registry at C:\Users\BCP\.julia\registries\General Updating git-repo https://github.com/JuliaRegistries/General.git Updating C:\Users\BCP\.julia\environments\v1.4\Project.toml [no changes] Updating C:\Users\BCP\.julia\environments\v1.4\Manifest.toml [no changes]

(@v1.4) pkg>

ablaom commented 4 years ago

Yes, MLJ 0.12.0 is released. Perhaps you have conflict with other stuff in your environment. You could first try installing in a fresh environment. Or you could try update MLJ@0.12 and see what conflicts there are.

drcxcruz commented 4 years ago

hi,

(@v1.4) pkg> update MLJ@0.12 Updating registry at C:\Users\BCP\.julia\registries\General Updating git-repo https://github.com/JuliaRegistries/General.git Updating C:\Users\BCP\.julia\environments\v1.4\Project.toml [no changes] Updating C:\Users\BCP\.julia\environments\v1.4\Manifest.toml [no changes]

I do not have a lot in my Project.toml file. I do not think i would have a dependency conflict.

[deps] CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" CategoricalArrays = "324d7699-5711-5eae-9e2f-1d82baa6b597" Clustering = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" Combinatorics = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" DecisionTree = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb" Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f" GLM = "38e38edf-8417-5370-95a0-9cbb8c7f171a" Hwloc = "0e44f5e4-bd66-52a0-8798-143a42290a1d" HypothesisTests = "09f84164-cd44-5f33-b23f-e6b0d136a0d5" IJulia = "7073ff75-c697-5162-941a-fcdaad2a7d2a" LIBSVM = "b1bec4e5-fd48-53fe-b0cb-9723c09d164b" MLJ = "add582a8-e3ab-11e8-2d5e-e98b27df1bc7" MLJBase = "a7f614a8-145f-11e9-1d2a-a57a1082229d" MLJModelInterface = "e80e1ace-859a-464e-9ed9-23947d8ae3ea" MLJModels = "d491faf4-2d78-11e9-2867-c94bc002c0b7" Missings = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28" MultivariateStats = "6f286f6a-111f-5878-ab1e-185364afe411" OhMyREPL = "5fb14364-9ced-5910-84b2-373655c76a03" PkgTemplates = "14b8a8f1-9102-5b29-a752-f990bacb7fe1" PrettyPrinting = "54e16d92-306c-5ea0-a30b-337be88ac337" Query = "1a8c2f83-1ff3-5112-b086-8aa67b057ba1" Queryverse = "612083be-0b0f-5412-89c1-4e7c75506a58" RDatasets = "ce6b1742-4840-55fa-b093-852dadbb1d8b" ShapML = "8523bd24-6f66-414b-9e1e-b02db3916d64" StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" Tables = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" VegaLite = "112f6efa-9a02-5b7d-90c0-432ed331239a" XGBoost = "009559a3-9522-5dbb-924b-0b6ed2b22bb9"

my manifest.toml file is:

This file is machine-generated - editing it directly is not advised

[[Arpack]] deps = ["Arpack_jll", "Libdl", "LinearAlgebra"] git-tree-sha1 = "2ff92b71ba1747c5fdd541f8fc87736d82f40ec9" uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97" version = "0.4.0"

[[Arpack_jll]] deps = ["Libdl", "OpenBLAS_jll", "Pkg"] git-tree-sha1 = "e214a9b9bd1b4e1b4f15b22c0994862b66af7ff7" uuid = "68821587-b530-5797-8361-c406ea357684" version = "3.5.0+3"

[[Arrow]] deps = ["CategoricalArrays", "Dates"] git-tree-sha1 = "c86df6ed41b3bd192d663e5e0e7cac0d11fd4375" uuid = "69666777-d1a9-59fb-9406-91d4454c9d45" version = "0.2.4"

[[BSON]] git-tree-sha1 = "dd36d7cf3d185eeaaf64db902c15174b22f5dafb" uuid = "fbb218c0-5317-5bc6-957e-2ee96dd4b1f0" version = "0.2.6"

[[Base64]] uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

[[BinaryProvider]] deps = ["Libdl", "Logging", "SHA"] git-tree-sha1 = "ecdec412a9abc8db54c0efc5548c64dfce072058" uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232" version = "0.5.10"

[[CSV]] deps = ["CategoricalArrays", "DataFrames", "Dates", "FilePathsBase", "Mmap", "Parsers", "PooledArrays", "Tables", "Unicode", "WeakRefStrings"] git-tree-sha1 = "8fe77a5478781d59a9ba17f0ac47dda2be5f8ae7" uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b" version = "0.6.1"

[[CSVFiles]] deps = ["CodecZlib", "DataValues", "FileIO", "HTTP", "IterableTables", "IteratorInterfaceExtensions", "TableShowUtils", "TableTraits", "TableTraitsUtils", "TextParse"] git-tree-sha1 = "96e5ca744988563da0b4dac199287e2790fdb5dd" uuid = "5d742f6a-9f54-50ce-8119-2520741973ca" version = "1.0.0"

[[CategoricalArrays]] deps = ["Compat", "DataAPI", "Future", "JSON", "Missings", "Printf", "Reexport", "Statistics", "Unicode"] git-tree-sha1 = "23d7324164c89638c18f6d7f90d972fa9c4fa9fb" uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597" version = "0.7.7"

[[Clustering]] deps = ["Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "SparseArrays", "Statistics", "StatsBase"] git-tree-sha1 = "b11c8d607af357776a046889a7c32567d05f1319" uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5" version = "0.14.1"

[[CodecZlib]] deps = ["BinaryProvider", "Libdl", "TranscodingStreams"] git-tree-sha1 = "05916673a2627dd91b4969ff8ba6941bc85a960e" uuid = "944b1d66-785c-5afd-91f1-9de20f533193" version = "0.6.0"

[[ColorTypes]] deps = ["FixedPointNumbers", "Random"] git-tree-sha1 = "6e7aa35d0294f647bb9c985ccc34d4f5d371a533" uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f" version = "0.10.6"

[[Combinatorics]] git-tree-sha1 = "08c8b6831dc00bfea825826be0bc8336fc369860" uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa" version = "1.0.2"

[[Compat]] deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "SHA", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"] git-tree-sha1 = "a6a8197ae253f2c1a22b2ae17c2dfaf5812c03aa" uuid = "34da2185-b29b-5c13-b0c7-acf172513d20" version = "3.13.0"

[[CompilerSupportLibraries_jll]] deps = ["Libdl", "Pkg"] git-tree-sha1 = "7c4f882c41faa72118841185afc58a2eb00ef612" uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae" version = "0.3.3+0"

[[ComputationalResources]] git-tree-sha1 = "52cb3ec90e8a8bea0e62e275ba577ad0f74821f7" uuid = "ed09eef8-17a6-5b46-8889-db040fac31e3" version = "0.3.2"

[[Conda]] deps = ["JSON", "VersionParsing"] git-tree-sha1 = "7a58bb32ce5d85f8bf7559aa7c2842f9aecf52fc" uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d" version = "1.4.1"

[[ConstructionBase]] git-tree-sha1 = "a2a6a5fea4d6f730ec4c18a76d27ec10e8ec1c50" uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9" version = "1.0.0"

[[Crayons]] git-tree-sha1 = "c437a9c2114c7ba19322712e58942b383ffbd6c0" uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f" version = "4.0.3"

[[DataAPI]] git-tree-sha1 = "176e23402d80e7743fc26c19c681bfb11246af32" uuid = "9a962f9c-6df0-11e9-0e5d-c546b8b5ee8a" version = "1.3.0"

[[DataFrames]] deps = ["CategoricalArrays", "Compat", "DataAPI", "Future", "InvertedIndices", "IteratorInterfaceExtensions", "Missings", "PooledArrays", "Printf", "REPL", "Reexport", "SortingAlgorithms", "Statistics", "TableTraits", "Tables", "Unicode"] git-tree-sha1 = "7d5bf815cc0b30253e3486e8ce2b93bf9d0faff6" uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0" version = "0.20.2"

[[DataStructures]] deps = ["InteractiveUtils", "OrderedCollections"] git-tree-sha1 = "edad9434967fdc0a2631a65d902228400642120c" uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8" version = "0.17.19"

[[DataTables]] deps = ["DataValues", "ReadOnlyArrays", "TableShowUtils", "TableTraitsUtils"] git-tree-sha1 = "9b069372a767fc6142feecc8e6d737d1b1de4711" uuid = "743a1d0a-8ebc-4f23-814b-50d006366bc6" version = "0.1.0"

[[DataValueInterfaces]] git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6" uuid = "e2d170a0-9d28-54be-80f0-106bbe20a464" version = "1.0.0"

[[DataValues]] deps = ["DataValueInterfaces", "Dates"] git-tree-sha1 = "d88a19299eba280a6d062e135a43f00323ae70bf" uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5" version = "0.4.13"

[[DataVoyager]] deps = ["DataValues", "Electron", "IterableTables", "IteratorInterfaceExtensions", "JSON", "TableTraits", "Test", "URIParser", "VegaLite"] git-tree-sha1 = "1236eefd73d969de06f5141a194318a1dc890797" uuid = "5721bf48-af8e-5845-8445-c9e18126e773" version = "1.0.0"

[[Dates]] deps = ["Printf"] uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[DecisionTree]] deps = ["DelimitedFiles", "Distributed", "LinearAlgebra", "Random", "ScikitLearnBase", "Statistics", "Test"] git-tree-sha1 = "9c2125bc1b4aa8bfe9a8654bf0b814acd725f9c8" uuid = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb" version = "0.10.5"

[[DelimitedFiles]] deps = ["Mmap"] uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"

[[Distances]] deps = ["LinearAlgebra", "Statistics"] git-tree-sha1 = "23717536c81b63e250f682b0e0933769eecd1411" uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7" version = "0.8.2"

[[Distributed]] deps = ["Random", "Serialization", "Sockets"] uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[Distributions]] deps = ["FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns"] git-tree-sha1 = "78c4c32a2357a00a0a7d614880f02c2c6e1ec73c" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" version = "0.23.4"

[[DoubleFloats]] deps = ["GenericSVD", "GenericSchur", "LinearAlgebra", "Polynomials", "Printf", "Quadmath", "Random", "Requires", "SpecialFunctions"] git-tree-sha1 = "a73770c1418f8a7c4c127328e0cd34fdcf0a1d29" uuid = "497a8b3b-efae-58df-a0af-a86822472b78" version = "1.1.12"

[[Electron]] deps = ["Base64", "FilePaths", "JSON", "Pkg", "Sockets", "URIParser", "UUIDs"] git-tree-sha1 = "4ae140449257856fd5bf23eb20ffbf94b0ab8cf9" uuid = "a1bb12fb-d4d1-54b4-b10a-ee7951ef7ad3" version = "2.0.1"

[[ExcelFiles]] deps = ["DataValues", "Dates", "ExcelReaders", "FileIO", "IterableTables", "IteratorInterfaceExtensions", "Printf", "PyCall", "TableShowUtils", "TableTraits", "TableTraitsUtils", "XLSX"] git-tree-sha1 = "f3e5f4279d77b74bf6aef2b53562f771cc5a0474" uuid = "89b67f3b-d1aa-5f6f-9ca4-282e8d98620d" version = "1.0.0"

[[ExcelReaders]] deps = ["DataValues", "Dates", "PyCall", "Test"] git-tree-sha1 = "6f9db420dd362bd5bcea3a0f6dabf8bda587fec3" uuid = "c04bee98-12a5-510c-87df-2a230cb6e075" version = "0.11.0"

[[ExprTools]] git-tree-sha1 = "6f0517056812fd6aa3af23d4b70d5325a2ae4e95" uuid = "e2ba6199-217a-4e67-a87a-7c52f15ade04" version = "0.1.1"

[[EzXML]] deps = ["Printf", "XML2_jll"] git-tree-sha1 = "0fa3b52a04a4e210aeb1626def9c90df3ae65268" uuid = "8f5d6c58-4d21-5cfd-889c-e3ad7ee6a615" version = "1.1.0"

[[FeatherFiles]] deps = ["Arrow", "DataValues", "FeatherLib", "FileIO", "IterableTables", "IteratorInterfaceExtensions", "TableShowUtils", "TableTraits", "TableTraitsUtils", "Test"] git-tree-sha1 = "a2f2b57b23be259d7839bebae2b8f7bba4851a9b" uuid = "b675d258-116a-5741-b937-b79f054b0542" version = "0.8.1"

[[FeatherLib]] deps = ["Arrow", "CategoricalArrays", "Dates", "FlatBuffers", "Mmap", "Random"] git-tree-sha1 = "a3d0c5ca2f08bc8fae4394775f371f8e032149ab" uuid = "409f5150-fb84-534f-94db-80d1e10f57e1" version = "0.2.0"

[[FileIO]] deps = ["Pkg"] git-tree-sha1 = "202335fd24c2776493e198d6c66a6d910400a895" uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549" version = "1.3.0"

[[FilePaths]] deps = ["FilePathsBase", "MacroTools", "Reexport", "URIParser"] git-tree-sha1 = "191796576b7f69cfe66d63b3d66a2741783204eb" uuid = "8fc22ac5-c921-52a6-82fd-178b2807b824" version = "0.8.0"

[[FilePathsBase]] deps = ["Dates", "LinearAlgebra", "Printf", "Test", "UUIDs"] git-tree-sha1 = "2ee1d999c462425e2f848524f732ed51bc1ab63a" uuid = "48062228-2e41-5def-b9a4-89aafe57970f" version = "0.6.2"

[[FileWatching]] uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"

[[FillArrays]] deps = ["LinearAlgebra", "Random", "SparseArrays"] git-tree-sha1 = "4783bbbeade37f2a8bd82af6c112510fde78e532" uuid = "1a297f60-69ca-5386-bcde-b61e274b549b" version = "0.8.12"

[[FixedPointNumbers]] git-tree-sha1 = "8fb797c37a3b7ced4327a05ac4ca0dd6a4f1ba92" uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93" version = "0.8.1"

[[FlatBuffers]] deps = ["Parameters", "Test"] git-tree-sha1 = "8582924ac52011d08da9cf1e67f13a71dbbc2594" uuid = "53afe959-3a16-52fa-a8da-cf864710bae9" version = "0.5.4"

[[Formatting]] deps = ["Printf"] git-tree-sha1 = "a0c901c29c0e7c763342751c0a94211d56c0de5c" uuid = "59287772-0a20-5a39-b81b-1366585eb4c0" version = "0.4.1"

[[Future]] deps = ["Random"] uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820"

[[GLM]] deps = ["Distributions", "LinearAlgebra", "Printf", "Random", "Reexport", "SparseArrays", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "StatsModels"] git-tree-sha1 = "db0ace36f9dbe7b6a7a08434c5921377e9df2c72" uuid = "38e38edf-8417-5370-95a0-9cbb8c7f171a" version = "1.3.9"

[[GenericSVD]] deps = ["LinearAlgebra"] git-tree-sha1 = "62909c3eda8a25b5673a367d1ad2392ebb265211" uuid = "01680d73-4ee2-5a08-a1aa-533608c188bb" version = "0.3.0"

[[GenericSchur]] deps = ["LinearAlgebra", "Printf"] git-tree-sha1 = "43b4dc5648028be2c6e96201aa3653903bd1af21" uuid = "c145ed77-6b09-5dd9-b285-bf645a82121e" version = "0.4.0"

[[HTTP]] deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"] git-tree-sha1 = "eca61b35cdd8cd2fcc5eec1eda766424a995b02f" uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3" version = "0.8.16"

[[Hwloc]] deps = ["BinaryProvider", "Libdl"] git-tree-sha1 = "bb23d264d76b82d1da80733cbb01bad8a11ae489" uuid = "0e44f5e4-bd66-52a0-8798-143a42290a1d" version = "1.0.3"

[[HypothesisTests]] deps = ["Combinatorics", "Distributions", "LinearAlgebra", "Random", "Rmath", "Roots", "Statistics", "StatsBase"] git-tree-sha1 = "be162cf7f657ec92ca02010c82f6323c4dbd2d14" uuid = "09f84164-cd44-5f33-b23f-e6b0d136a0d5" version = "0.10.0"

[[IJulia]] deps = ["Base64", "Conda", "Dates", "InteractiveUtils", "JSON", "Markdown", "MbedTLS", "Pkg", "Printf", "REPL", "Random", "SoftGlobalScope", "Test", "UUIDs", "ZMQ"] git-tree-sha1 = "ce336ee8224143d053bf053680bf9182adfd8638" uuid = "7073ff75-c697-5162-941a-fcdaad2a7d2a" version = "1.21.2"

[[IniFile]] deps = ["Test"] git-tree-sha1 = "098e4d2c533924c921f9f9847274f2ad89e018b8" uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f" version = "0.5.0"

[[InteractiveUtils]] deps = ["Markdown"] uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"

[[Intervals]] deps = ["Dates", "Printf", "RecipesBase", "TimeZones"] git-tree-sha1 = "6cb8eeae36aa58b35d5e41d71be5cd67bc6fca87" uuid = "d8418881-c3e1-53bb-8760-2df7ec849ed5" version = "1.3.4"

[[InvertedIndices]] deps = ["Test"] git-tree-sha1 = "15732c475062348b0165684ffe28e85ea8396afc" uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f" version = "1.0.0"

[[IterableTables]] deps = ["DataValues", "IteratorInterfaceExtensions", "Requires", "TableTraits", "TableTraitsUtils"] git-tree-sha1 = "70300b876b2cebde43ebc0df42bc8c94a144e1b4" uuid = "1c8ee90f-4401-5389-894e-7a04a3dc0f4d" version = "1.0.0"

[[IteratorInterfaceExtensions]] git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856" uuid = "82899510-4779-5014-852e-03e436cf321d" version = "1.0.0"

[[JLSO]] deps = ["BSON", "CodecZlib", "Memento", "Pkg", "Serialization"] git-tree-sha1 = "74a940247c7af33455f73d416be0f6199875a0c0" uuid = "9da8a3cd-07a3-59c0-a743-3fdc52c30d11" version = "2.1.0"

[[JSON]] deps = ["Dates", "Mmap", "Parsers", "Unicode"] git-tree-sha1 = "b34d7cef7b337321e97d22242c3c2b91f476748e" uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6" version = "0.21.0"

[[JSONSchema]] deps = ["BinaryProvider", "HTTP", "JSON"] git-tree-sha1 = "b0a7f9328967df5213691d318a03cf70ea8c76b1" uuid = "7d188eb4-7ad8-530c-ae41-71a32a6d4692" version = "0.2.0"

[[LIBLINEAR]] deps = ["DelimitedFiles", "Libdl", "SparseArrays", "Test"] git-tree-sha1 = "42cacc29d9b4ae77b6702c181bbfa58f14d8ef7a" uuid = "2d691ee1-e668-5016-a719-b2531b85e0f5" version = "0.5.1"

[[LIBSVM]] deps = ["Compat", "LIBLINEAR", "Libdl", "ScikitLearnBase", "SparseArrays"] git-tree-sha1 = "05d574c6598bce023ba6f2d2aa99ffd4f8e00789" uuid = "b1bec4e5-fd48-53fe-b0cb-9723c09d164b" version = "0.4.0"

[[LearnBase]] git-tree-sha1 = "a0d90569edd490b82fdc4dc078ea54a5a800d30a" uuid = "7f8f8fb0-2700-5f03-b4bd-41f8cfc144b6" version = "0.4.1"

[[LibGit2]] deps = ["Printf"] uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"

[[Libdl]] uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[Libiconv_jll]] deps = ["Libdl", "Pkg"] git-tree-sha1 = "c9d4035d7481bcdff2babf5a55525a818ef8ed8f" uuid = "94ce4f54-9a6c-5748-9c1c-f9c7231a4531" version = "1.16.0+5"

[[LinearAlgebra]] deps = ["Libdl"] uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

[[Logging]] uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"

[[LossFunctions]] deps = ["LearnBase", "Markdown", "RecipesBase", "SparseArrays", "StatsBase"] git-tree-sha1 = "3cd347266e394a066ca7f17bd8ff589ff5ce1d35" uuid = "30fc2ffe-d236-52d8-8643-a9d8f7c094a7" version = "0.6.2"

[[MLJ]] deps = ["CategoricalArrays", "ComputationalResources", "Distributed", "Distributions", "LinearAlgebra", "MLJBase", "MLJModels", "MLJScientificTypes", "MLJTuning", "Pkg", "ProgressMeter", "Random", "Statistics", "StatsBase", "Tables"] git-tree-sha1 = "1e611c42e6d7edf9fe14fd72a9a882d10f1dcd81" uuid = "add582a8-e3ab-11e8-2d5e-e98b27df1bc7" version = "0.11.2"

[[MLJBase]] deps = ["CategoricalArrays", "ComputationalResources", "Dates", "DelimitedFiles", "Distributed", "Distributions", "HTTP", "InteractiveUtils", "InvertedIndices", "JLSO", "JSON", "LinearAlgebra", "LossFunctions", "MLJModelInterface", "MLJScientificTypes", "Missings", "OrderedCollections", "Parameters", "PrettyTables", "ProgressMeter", "Random", "ScientificTypes", "Statistics", "StatsBase", "Tables"] git-tree-sha1 = "80cf971e619872c33f9486eacbcbd5b6b9068d2b" uuid = "a7f614a8-145f-11e9-1d2a-a57a1082229d" version = "0.13.5"

[[MLJModelInterface]] deps = ["Random", "ScientificTypes"] git-tree-sha1 = "3cc9bd71e52d3114f3a17cb71119ec3f69a0cf10" uuid = "e80e1ace-859a-464e-9ed9-23947d8ae3ea" version = "0.2.7"

[[MLJModels]] deps = ["CategoricalArrays", "Dates", "Distances", "Distributions", "InteractiveUtils", "LinearAlgebra", "MLJBase", "MLJModelInterface", "MultivariateStats", "OrderedCollections", "Parameters", "Pkg", "Random", "Requires", "ScientificTypes", "Statistics", "StatsBase", "Tables"] git-tree-sha1 = "799e9dc9bb5ba96729142713ce314edbbd072c7c" uuid = "d491faf4-2d78-11e9-2867-c94bc002c0b7" version = "0.9.10"

[[MLJScientificTypes]] deps = ["CategoricalArrays", "ColorTypes", "Dates", "PrettyTables", "ScientificTypes", "Tables"] git-tree-sha1 = "582d08e1a6853b748fecb9817120346dd01d52e1" uuid = "2e2323e0-db8b-457b-ae0d-bdfb3bc63afd" version = "0.2.5"

[[MLJTuning]] deps = ["ComputationalResources", "Distributed", "Distributions", "MLJBase", "MLJModelInterface", "ProgressMeter", "Random", "RecipesBase"] git-tree-sha1 = "f9aa8dafd3dc4b8d195aa1b5518188cfd3e181e1" uuid = "03970b2e-30c4-11ea-3135-d1576263f10f" version = "0.3.6"

[[MacroTools]] deps = ["Markdown", "Random"] git-tree-sha1 = "f7d2e3f654af75f01ec49be82c231c382214223a" uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09" version = "0.5.5"

[[Markdown]] deps = ["Base64"] uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"

[[MbedTLS]] deps = ["Dates", "MbedTLS_jll", "Random", "Sockets"] git-tree-sha1 = "426a6978b03a97ceb7ead77775a1da066343ec6e" uuid = "739be429-bea8-5141-9913-cc70e7f3736d" version = "1.0.2"

[[MbedTLS_jll]] deps = ["Libdl", "Pkg"] git-tree-sha1 = "a0cb0d489819fa7ea5f9fa84c7e7eba19d8073af" uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1" version = "2.16.6+1"

[[MemPool]] deps = ["DataStructures", "Distributed", "Mmap", "Random", "Serialization", "Sockets"] git-tree-sha1 = "043d64da1c228e53bf5c2c70ec9a78feb43771be" uuid = "f9f48841-c794-520a-933b-121f7ba6ed94" version = "0.3.1"

[[Memento]] deps = ["Dates", "Distributed", "JSON", "Serialization", "Sockets", "Syslogs", "Test", "TimeZones", "UUIDs"] git-tree-sha1 = "090463b13da88689e5eae6468a6f531a21392175" uuid = "f28f55f0-a522-5efc-85c2-fe41dfb9b2d9" version = "0.12.1"

[[Missings]] deps = ["DataAPI"] git-tree-sha1 = "de0a5ce9e5289f27df672ffabef4d1e5861247d5" uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28" version = "0.4.3"

[[Mmap]] uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[Mocking]] deps = ["ExprTools"] git-tree-sha1 = "916b850daad0d46b8c71f65f719c49957e9513ed" uuid = "78c3b35d-d492-501b-9361-3d52fe80e533" version = "0.7.1"

[[MultivariateStats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "Statistics", "StatsBase"] git-tree-sha1 = "352fae519b447bf52e6de627b89f448bcd469e4e" uuid = "6f286f6a-111f-5878-ab1e-185364afe411" version = "0.7.0"

[[Mustache]] deps = ["Printf", "Tables"] git-tree-sha1 = "fcfc8266461f2905534aa00c0fc59b8751b1026e" uuid = "ffc61752-8dc7-55ee-8c37-f3e9cdd09e70" version = "1.0.3"

[[NearestNeighbors]] deps = ["Distances", "StaticArrays"] git-tree-sha1 = "8bc6180f328f3c0ea2663935db880d34c57d6eae" uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce" version = "0.4.4"

[[NodeJS]] deps = ["Pkg"] git-tree-sha1 = "350ac618f41958e6e0f6b0d2005ae4547eb1b503" uuid = "2bd173c7-0d6d-553b-b6af-13a54713934c" version = "1.1.1"

[[Nullables]] git-tree-sha1 = "8f87854cc8f3685a60689d8edecaa29d2251979b" uuid = "4d1e1d77-625e-5b40-9113-a560ec7a8ecd" version = "1.0.0"

[[OhMyREPL]] deps = ["Crayons", "Markdown", "Pkg", "Printf", "REPL", "Tokenize"] git-tree-sha1 = "24d9d3978708245979dddb0c7b382ff345f2ee55" uuid = "5fb14364-9ced-5910-84b2-373655c76a03" version = "0.5.5"

[[OpenBLAS_jll]] deps = ["CompilerSupportLibraries_jll", "Libdl", "Pkg"] git-tree-sha1 = "0c922fd9634e358622e333fc58de61f05a048492" uuid = "4536629a-c528-5b80-bd46-f80d51c5b363" version = "0.3.9+5"

[[OpenSpecFun_jll]] deps = ["CompilerSupportLibraries_jll", "Libdl", "Pkg"] git-tree-sha1 = "d51c416559217d974a1113522d5919235ae67a87" uuid = "efe28fd5-8261-553b-a9e1-b2916fc3738e" version = "0.5.3+3"

[[OrderedCollections]] git-tree-sha1 = "293b70ac1780f9584c89268a6e2a560d938a7065" uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d" version = "1.3.0"

[[PDMats]] deps = ["Arpack", "LinearAlgebra", "SparseArrays", "SuiteSparse", "Test"] git-tree-sha1 = "2fc6f50ddd959e462f0a2dbc802ddf2a539c6e35" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" version = "0.9.12"

[[Parameters]] deps = ["OrderedCollections", "UnPack"] git-tree-sha1 = "38b2e970043613c187bd56a995fe2e551821eb4a" uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a" version = "0.12.1"

[[Parquet]] deps = ["CodecZlib", "MemPool", "ProtoBuf", "Snappy", "Thrift"] git-tree-sha1 = "1d4535df2be334e15248a5dbc9ae4f182787b848" uuid = "626c502c-15b0-58ad-a749-f091afb673ae" version = "0.3.0"

[[ParquetFiles]] deps = ["DataValues", "FileIO", "IterableTables", "IteratorInterfaceExtensions", "Parquet", "TableShowUtils", "TableTraits", "Test"] git-tree-sha1 = "7b4414214f41e2ae7844ea827bfd4ec7ae71e749" uuid = "46a55296-af5a-53b0-aaa0-97023b66127f" version = "0.2.0"

[[Parsers]] deps = ["Dates", "Test"] git-tree-sha1 = "20ef902ea02f7000756a4bc19f7b9c24867c6211" uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0" version = "1.0.6"

[[Pkg]] deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"] uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"

[[PkgTemplates]] deps = ["Dates", "InteractiveUtils", "LibGit2", "Mustache", "Parameters", "Pkg", "REPL", "UUIDs"] git-tree-sha1 = "c5f9432034b413d5addfb97c7066991718b032a4" uuid = "14b8a8f1-9102-5b29-a752-f990bacb7fe1" version = "0.7.6"

[[Polynomials]] deps = ["Intervals", "LinearAlgebra", "RecipesBase"] git-tree-sha1 = "192d7561c72579e9dd3a6c845ef911b139c78ba6" uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45" version = "1.1.2"

[[PooledArrays]] deps = ["DataAPI"] git-tree-sha1 = "b1333d4eced1826e15adbdf01a4ecaccca9d353c" uuid = "2dfb63ee-cc39-5dd5-95bd-886bf059d720" version = "0.5.3"

[[PrettyPrinting]] git-tree-sha1 = "cb3bd68c8e0fabf6e13c10bdf11713068e748a79" uuid = "54e16d92-306c-5ea0-a30b-337be88ac337" version = "0.2.0"

[[PrettyTables]] deps = ["Crayons", "Formatting", "Parameters", "Reexport", "Tables"] git-tree-sha1 = "8458dc04a493ae5c2fed3796c1d3117972c69694" uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d" version = "0.9.1"

[[Printf]] deps = ["Unicode"] uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"

[[ProgressMeter]] deps = ["Distributed", "Printf"] git-tree-sha1 = "3e1784c27847bba115815d4d4e668b99873985e5" uuid = "92933f4c-e287-5a05-a399-4b506db050ca" version = "1.3.1"

[[ProtoBuf]] git-tree-sha1 = "51b74991da46594fb411a715e7e092bef50b99ff" uuid = "3349acd9-ac6a-5e09-bcdb-63829b23a429" version = "0.8.0"

[[PyCall]] deps = ["Conda", "Dates", "Libdl", "LinearAlgebra", "MacroTools", "Serialization", "VersionParsing"] git-tree-sha1 = "3a3fdb9000d35958c9ba2323ca7c4958901f115d" uuid = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0" version = "1.91.4"

[[QuadGK]] deps = ["DataStructures", "LinearAlgebra"] git-tree-sha1 = "0ab8a09d4478ebeb99a706ecbf8634a65077ccdc" uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc" version = "2.4.0"

[[Quadmath]] deps = ["Printf", "Random", "Requires"] git-tree-sha1 = "cd993c45147a8432bf24358f14bf2cfd4aeb14df" uuid = "be4d8f0f-7fa4-5f49-b795-2f01399ab2dd" version = "0.5.4"

[[Query]] deps = ["DataValues", "IterableTables", "MacroTools", "QueryOperators", "Statistics"] git-tree-sha1 = "fd506b7101702daa4fb13cdffca771180d16c19c" uuid = "1a8c2f83-1ff3-5112-b086-8aa67b057ba1" version = "0.12.2"

[[QueryOperators]] deps = ["DataStructures", "DataValues", "IteratorInterfaceExtensions", "TableShowUtils"] git-tree-sha1 = "7ffa41275edd6e0374a9ae8e3b048840867a06d9" uuid = "2aef5ad7-51ca-5a8f-8e88-e75cf067b44b" version = "0.9.1"

[[Queryverse]] deps = ["CSVFiles", "DataFrames", "DataTables", "DataValues", "DataVoyager", "ExcelFiles", "FeatherFiles", "FileIO", "IterableTables", "ParquetFiles", "Query", "Reexport", "StatFiles", "VegaLite"] git-tree-sha1 = "c1823af6b8362bb6539067b8b792bdfb4a182e07" uuid = "612083be-0b0f-5412-89c1-4e7c75506a58" version = "0.6.1"

[[RData]] deps = ["CategoricalArrays", "CodecZlib", "DataFrames", "Dates", "FileIO", "Requires", "TimeZones"] git-tree-sha1 = "820d9bf1ce85f99292656941482faa1e277e7247" uuid = "df47a6cb-8c03-5eed-afd8-b6050d6c41da" version = "0.7.1"

[[RDatasets]] deps = ["CSV", "CodecZlib", "DataFrames", "FileIO", "Printf", "RData", "Reexport"] git-tree-sha1 = "511854268c47438216a7640341ad4ce14b3463bb" uuid = "ce6b1742-4840-55fa-b093-852dadbb1d8b" version = "0.6.9"

[[REPL]] deps = ["InteractiveUtils", "Markdown", "Sockets"] uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"

[[Random]] deps = ["Serialization"] uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"

[[ReadOnlyArrays]] deps = ["SparseArrays", "Test"] git-tree-sha1 = "65f17072a35c2be7ac8941aeeae489013212e71f" uuid = "988b38a3-91fc-5605-94a2-ee2116b3bd83" version = "0.1.1"

[[ReadStat]] deps = ["DataValues", "Dates", "ReadStat_jll"] git-tree-sha1 = "9d79d20c21333631b72846d0722cfee9398c6a82" uuid = "d71aba96-b539-5138-91ee-935c3ee1374c" version = "1.0.2"

[[ReadStat_jll]] deps = ["Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] git-tree-sha1 = "3f3eb8ff28924309935adf900f65bb6b96b3d03f" uuid = "a4dc8951-f1cc-5499-9034-9ec1c3e64557" version = "1.1.1+0"

[[RecipesBase]] git-tree-sha1 = "54f8ceb165a0f6d083f0d12cb4996f5367c6edbc" uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01" version = "1.0.1"

[[Reexport]] deps = ["Pkg"] git-tree-sha1 = "7b1d07f411bc8ddb7977ec7f377b97b158514fe0" uuid = "189a3867-3050-52da-a836-e630ba90ab69" version = "0.2.0"

[[Requires]] deps = ["UUIDs"] git-tree-sha1 = "d37400976e98018ee840e0ca4f9d20baa231dc6b" uuid = "ae029012-a4dd-5104-9daa-d747884805df" version = "1.0.1"

[[Rmath]] deps = ["Random", "Rmath_jll"] git-tree-sha1 = "86c5647b565873641538d8f812c04e4c9dbeb370" uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa" version = "0.6.1"

[[Rmath_jll]] deps = ["Libdl", "Pkg"] git-tree-sha1 = "d76185aa1f421306dec73c057aa384bad74188f0" uuid = "f50d1b31-88e8-58de-be2c-1cc44531875f" version = "0.2.2+1"

[[Roots]] deps = ["Printf"] git-tree-sha1 = "c2f7348c55d1433d1cab0159b4d2c6d27af36fc4" uuid = "f2b01f46-fcfa-551c-844a-d8ac1e96c665" version = "1.0.2"

[[SHA]] uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"

[[ScientificTypes]] git-tree-sha1 = "1a9f881c800ea009fb7f8b5274f04e4e8a5faef8" uuid = "321657f4-b219-11e9-178b-2701a2544e81" version = "0.8.0"

[[ScikitLearnBase]] deps = ["LinearAlgebra", "Random", "Statistics"] git-tree-sha1 = "7877e55c1523a4b336b433da39c8e8c08d2f221f" uuid = "6e75b9c4-186b-50bd-896f-2d2496a4843e" version = "0.5.0"

[[Serialization]] uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"

[[Setfield]] deps = ["ConstructionBase", "Future", "MacroTools", "Requires"] git-tree-sha1 = "7a151f918819326a6003dba451dabe65f8c0f6fb" uuid = "efcf1570-3423-57d1-acb7-fd33fddbac46" version = "0.6.0"

[[ShapML]] deps = ["DataFrames", "Distributed", "Random", "Statistics"] git-tree-sha1 = "4acfd4e2abd4cc419bfbead0a9a1fb5270a57f56" uuid = "8523bd24-6f66-414b-9e1e-b02db3916d64" version = "0.3.0"

[[SharedArrays]] deps = ["Distributed", "Mmap", "Random", "Serialization"] uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383"

[[ShiftedArrays]] git-tree-sha1 = "22395afdcf37d6709a5a0766cc4a5ca52cb85ea0" uuid = "1277b4bf-5013-50f5-be3d-901d8477a67a" version = "1.0.0"

[[Snappy]] deps = ["BinaryProvider", "Libdl", "Random", "Test"] git-tree-sha1 = "25620a91907972a05863941d6028791c2613888e" uuid = "59d4ed8c-697a-5b28-a4c7-fe95c22820f9" version = "0.3.0"

[[Sockets]] uuid = "6462fe0b-24de-5631-8697-dd941f90decc"

[[SoftGlobalScope]] deps = ["Test"] git-tree-sha1 = "012661b70364840fcd380912d878d96f7bf95ff3" uuid = "b85f4697-e234-5449-a836-ec8e2f98b302" version = "1.0.10"

[[SortingAlgorithms]] deps = ["DataStructures", "Random", "Test"] git-tree-sha1 = "03f5898c9959f8115e30bc7226ada7d0df554ddd" uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c" version = "0.3.1"

[[SparseArrays]] deps = ["LinearAlgebra", "Random"] uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[SpecialFunctions]] deps = ["OpenSpecFun_jll"] git-tree-sha1 = "d8d8b8a9f4119829410ecd706da4cc8594a1e020" uuid = "276daf66-3868-5448-9aa4-cd146d93841b" version = "0.10.3"

[[StatFiles]] deps = ["DataValues", "FileIO", "IterableTables", "IteratorInterfaceExtensions", "ReadStat", "TableShowUtils", "TableTraits", "TableTraitsUtils", "Test"] git-tree-sha1 = "28466ea10caec61c476a262172319d2edf248187" uuid = "1463e38c-9381-5320-bcd4-4134955f093a" version = "0.8.0"

[[StaticArrays]] deps = ["LinearAlgebra", "Random", "Statistics"] git-tree-sha1 = "5c06c0aeb81bef54aed4b3f446847905eb6cbda0" uuid = "90137ffa-7385-5640-81b9-e52037218182" version = "0.12.3"

[[Statistics]] deps = ["LinearAlgebra", "SparseArrays"] uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"

[[StatsBase]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics"] git-tree-sha1 = "a6102b1f364befdb05746f386b67c6b7e3262c45" uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91" version = "0.33.0"

[[StatsFuns]] deps = ["Rmath", "SpecialFunctions"] git-tree-sha1 = "04a5a8e6ab87966b43f247920eab053fd5fdc925" uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c" version = "0.9.5"

[[StatsModels]] deps = ["DataAPI", "DataStructures", "LinearAlgebra", "ShiftedArrays", "SparseArrays", "StatsBase", "Tables"] git-tree-sha1 = "5a140e0bf5d92b2c5c0daa0dcefdadbb57c8a7fb" uuid = "3eaba693-59b7-5ba5-a881-562e759f1c8d" version = "0.6.11"

[[SuiteSparse]] deps = ["Libdl", "LinearAlgebra", "Serialization", "SparseArrays"] uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9"

[[Syslogs]] deps = ["Printf", "Sockets"] git-tree-sha1 = "46badfcc7c6e74535cc7d833a91f4ac4f805f86d" uuid = "cea106d9-e007-5e6c-ad93-58fe2094e9c4" version = "0.3.0"

[[TableShowUtils]] deps = ["DataValues", "Dates", "JSON", "Markdown", "Test"] git-tree-sha1 = "14c54e1e96431fb87f0d2f5983f090f1b9d06457" uuid = "5e66a065-1f0a-5976-b372-e0b8c017ca10" version = "0.2.5"

[[TableTraits]] deps = ["IteratorInterfaceExtensions"] git-tree-sha1 = "b1ad568ba658d8cbb3b892ed5380a6f3e781a81e" uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c" version = "1.0.0"

[[TableTraitsUtils]] deps = ["DataValues", "IteratorInterfaceExtensions", "Missings", "TableTraits"] git-tree-sha1 = "8fc12ae66deac83e44454e61b02c37b326493233" uuid = "382cd787-c1b6-5bf2-a167-d5b971a19bda" version = "1.0.1"

[[Tables]] deps = ["DataAPI", "DataValueInterfaces", "IteratorInterfaceExtensions", "LinearAlgebra", "TableTraits", "Test"] git-tree-sha1 = "c45dcc27331febabc20d86cb3974ef095257dcf3" uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c" version = "1.0.4"

[[Test]] deps = ["Distributed", "InteractiveUtils", "Logging", "Random"] uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[TextParse]] deps = ["CodecZlib", "DataStructures", "Dates", "DoubleFloats", "Mmap", "Nullables", "WeakRefStrings"] git-tree-sha1 = "df02daeb8b9402d3eada898f43423797bb1f84b0" uuid = "e0df1984-e451-5cb5-8b61-797a481e67e3" version = "1.0.0"

[[Thrift]] deps = ["Distributed", "Sockets", "ThriftJuliaCompiler_jll"] git-tree-sha1 = "e54ac3726bec5038bc8b1324444fe21f1de76d90" uuid = "8d9c9c80-f77e-5080-9541-c6f69d204e22" version = "0.7.0"

[[ThriftJuliaCompiler_jll]] deps = ["Libdl", "Pkg"] git-tree-sha1 = "d144be217b8194d8242e354ae4400696d95b94ef" uuid = "815b9798-8dd0-5549-95cc-3cf7d01bce66" version = "0.11.0+0"

[[TimeZones]] deps = ["Dates", "EzXML", "Mocking", "Printf", "RecipesBase", "Serialization", "Unicode"] git-tree-sha1 = "db7bc2051d4c2e5f336409224df81485c00de6cb" uuid = "f269a46b-ccf7-5d73-abea-4c690281aa53" version = "1.2.0"

[[Tokenize]] git-tree-sha1 = "73c00ad506d88a7e8e4f90f48a70943101728227" uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624" version = "0.5.8"

[[TranscodingStreams]] deps = ["Random", "Test"] git-tree-sha1 = "7c53c35547de1c5b9d46a4797cf6d8253807108c" uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa" version = "0.9.5"

[[URIParser]] deps = ["Unicode"] git-tree-sha1 = "53a9f49546b8d2dd2e688d216421d050c9a31d0d" uuid = "30578b45-9adc-5946-b283-645ec420af67" version = "0.4.1"

[[UUIDs]] deps = ["Random", "SHA"] uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"

[[UnPack]] git-tree-sha1 = "d4bfa022cd30df012700cf380af2141961bb3bfb" uuid = "3a884ed6-31ef-47d7-9d2a-63182c4928ed" version = "1.0.1"

[[Unicode]] uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"

[[Vega]] deps = ["DataStructures", "DataValues", "Dates", "FileIO", "FilePaths", "IteratorInterfaceExtensions", "JSON", "JSONSchema", "MacroTools", "NodeJS", "Pkg", "REPL", "Random", "Setfield", "TableTraits", "TableTraitsUtils", "URIParser"] git-tree-sha1 = "3456f64280eece31e30ef38b4bf42d69e2f654a5" uuid = "239c3e63-733f-47ad-beb7-a12fde22c578" version = "1.0.0"

[[VegaLite]] deps = ["DataStructures", "DataValues", "Dates", "FileIO", "FilePaths", "IteratorInterfaceExtensions", "JSON", "JSONSchema", "MacroTools", "NodeJS", "Pkg", "REPL", "Random", "Setfield", "TableTraits", "TableTraitsUtils", "URIParser", "Vega"] git-tree-sha1 = "96bbaa70e8f60b836c2dee451ca936a9b15f8e86" uuid = "112f6efa-9a02-5b7d-90c0-432ed331239a" version = "2.2.0"

[[VersionParsing]] git-tree-sha1 = "80229be1f670524750d905f8fc8148e5a8c4537f" uuid = "81def892-9a0e-5fdd-b105-ffc91e053289" version = "1.2.0"

[[WeakRefStrings]] deps = ["DataAPI", "Random", "Test"] git-tree-sha1 = "28807f85197eaad3cbd2330386fac1dcb9e7e11d" uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5" version = "0.6.2"

[[XGBoost]] deps = ["Libdl", "Printf", "Random", "SparseArrays", "Statistics", "Test", "XGBoost_jll"] git-tree-sha1 = "8a692f817f1a6c15ef4913a0ffefa6163117f43d" uuid = "009559a3-9522-5dbb-924b-0b6ed2b22bb9" version = "1.1.1"

[[XGBoost_jll]] deps = ["CompilerSupportLibraries_jll", "Libdl", "Pkg"] git-tree-sha1 = "72c0d8bfbb56856c5f25668b72247ec18bbf5579" uuid = "a5c6f535-4255-5ca2-a466-0e519f119c46" version = "1.1.1+0"

[[XLSX]] deps = ["Dates", "EzXML", "Printf", "Tables", "ZipFile"] git-tree-sha1 = "9ec08085825cf7a03103daffda9ce3220957abef" uuid = "fdbf4ff8-1666-58a4-91e7-1b58723a45e0" version = "0.7.2"

[[XML2_jll]] deps = ["Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"] git-tree-sha1 = "432d91f45e950f2f2bda5c0f4e2b938c14493af9" uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a" version = "2.9.10+1"

[[ZMQ]] deps = ["FileWatching", "Sockets", "ZeroMQ_jll"] git-tree-sha1 = "fc68e8a3719166950a0f3e390a14c7302c48f8de" uuid = "c2297ded-f4af-51ae-bb23-16f91089e4e1" version = "1.2.1"

[[ZeroMQ_jll]] deps = ["Libdl", "Pkg"] git-tree-sha1 = "733352667c60ce39dfd3017db9b798b288c87417" uuid = "8f1865be-045e-5c20-9c9f-bfbfb0764568" version = "4.3.2+4"

[[ZipFile]] deps = ["Libdl", "Printf", "Zlib_jll"] git-tree-sha1 = "254975fef2fc526583bb9b7c9420fe66ffe09f2f" uuid = "a5390f91-8eb1-5f08-bee0-b1d1ffed6cea" version = "0.9.2"

[[Zlib_jll]] deps = ["Libdl", "Pkg"] git-tree-sha1 = "622d8b6dc0c7e8029f17127703de9819134d1b71" uuid = "83775a58-1f1d-513f-b197-d71354ab007a" version = "1.2.11+14"

ablaom commented 4 years ago

Sorry, I guess you should do add MLJ@0.12.0 not update MLJ@0.12.0 to reveal a conflict.

You may also want to try ]instantiate -p.

drcxcruz commented 4 years ago

hi,

I am surprise! DataFrames?!? I do __pkg>update_ almost every day :)

(@v1.4) pkg> update DataFrames Updating registry at C:\Users\BCP\.julia\registries\General Updating git-repo https://github.com/JuliaRegistries/General.git Installed Polynomials ─ v1.1.3 Updating C:\Users\BCP\.julia\environments\v1.4\Project.toml [no changes] Updating C:\Users\BCP\.julia\environments\v1.4\Manifest.toml [f27b6e38] ↑ Polynomials v1.1.2 ⇒ v1.1.3

*(@v1.4) pkg> add MLJ@0.12.0 Resolving package versions... ERROR: Unsatisfiable requirements detected for package DataFrames [a93c6f00]: DataFrames [a93c6f00] log: ├─possible versions are: [0.11.7, 0.12.0, 0.13.0-0.13.1, 0.14.0-0.14.1, 0.15.0-0.15.2, 0.16.0, 0.17.0-0.17.1, 0.18.0-0.18.4, 0.19.0-0.19.4, 0.20.0-0.20.2, 0.21.0-0.21.4] or uninstalled ├─restricted to versions by an explicit requirement, leaving only versions [0.11.7, 0.12.0, 0.13.0-0.13.1, 0.14.0-0.14.1, 0.15.0-0.15.2, 0.16.0, 0.17.0-0.17.1, 0.18.0-0.18.4, 0.19.0-0.19.4, 0.20.0-0.20.2, 0.21.0-0.21.4] ├─restricted by compatibility requirements with RDatasets [ce6b1742] to versions: [0.13.0-0.13.1, 0.14.0-0.14.1, 0.15.0-0.15.2, 0.16.0, 0.17.0-0.17.1, 0.18.0-0.18.4, 0.19.0-0.19.4, 0.20.0-0.20.2, 0.21.0-0.21.4] │ └─RDatasets [ce6b1742] log: │ ├─possible versions are: [0.5.0, 0.6.0-0.6.9] or uninstalled │ └─restricted to versions by an explicit requirement, leaving only versions [0.5.0, 0.6.0-0.6.9] ├─restricted by compatibility requirements with CategoricalArrays [324d7699] to versions: 0.21.0-0.21.4 or uninstalled, leaving only versions: 0.21.0-0.21.4 │ └─CategoricalArrays [324d7699] log: │ ├─possible versions are: [0.3.11, 0.3.13-0.3.14, 0.4.0, 0.5.0-0.5.5, 0.6.0, 0.7.0-0.7.7, 0.8.0-0.8.1] or uninstalled │ ├─restricted to versions by an explicit requirement, leaving only versions [0.3.11, 0.3.13-0.3.14, 0.4.0, 0.5.0-0.5.5, 0.6.0, 0.7.0-0.7.7, 0.8.0-0.8.1] │ ├─restricted by compatibility requirements with MLJ [add582a8] to versions: 0.8.0-0.8.1 │ │ └─MLJ [add582a8] log: │ │ ├─possible versions are: [0.1.0-0.1.1, 0.2.0-0.2.5, 0.3.0, 0.4.0, 0.5.0-0.5.9, 0.6.0-0.6.1, 0.7.0, 0.8.0, 0.9.0-0.9.3, 0.10.0-0.10.3, 0.11.0-0.11.5, 0.12.0] or uninstalled │ │ └─restricted to versions 0.12.0 by an explicit requirement, leaving only versions 0.12.0 │ └─restricted by compatibility requirements with MLJBase [a7f614a8] to versions: 0.8.1 │ └─MLJBase [a7f614a8] log: │ ├─possible versions are: [0.1.0-0.1.1, 0.2.0-0.2.6, 0.3.0, 0.4.0, 0.5.0, 0.6.0, 0.7.0-0.7.5, 0.8.0-0.8.4, 0.9.0-0.9.2, 0.10.0-0.10.1, 0.11.0-0.11.10, 0.12.0-0.12.8, 0.13.0-0.13.10, 0.14.0-0.14.1] or uninstalled │ ├─restricted to versions by an explicit requirement, leaving only versions [0.1.0-0.1.1, 0.2.0-0.2.6, 0.3.0, 0.4.0, 0.5.0, 0.6.0, 0.7.0-0.7.5, 0.8.0-0.8.4, 0.9.0-0.9.2, 0.10.0-0.10.1, 0.11.0-0.11.10, 0.12.0-0.12.8, 0.13.0-0.13.10, 0.14.0-0.14.1] │ └─restricted by compatibility requirements with MLJ [add582a8] to versions: 0.14.0-0.14.1 │ └─MLJ [add582a8] log: see above └─restricted by compatibility requirements with ShapML [8523bd24] to versions: 0.20.0-0.20.2 — no versions left └─ShapML [8523bd24] log: ├─possible versions are: [0.1.0, 0.2.0, 0.3.0] or uninstalled └─restricted to versions by an explicit requirement, leaving only versions [0.1.0, 0.2.0, 0.3.0]**

(@v1.4) pkg>

ablaom commented 4 years ago

Here the problem is ShapML which has not lifted their DataFrames [compat]:

https://github.com/nredell/ShapML.jl/blob/56f37f672704d0016cf97fe665a6856ff895dffc/Project.toml#L15

Try removing ShapML. (You could also post an issue at ShapML.jl requesting they extend their DataFrames [compat] to "^0.21").

ablaom commented 4 years ago

More generally, when having problems like this, you can install MLJ in a fresh environment, pin it to the new version, and then add packages you want to use one at a time until you get a conflict.

drcxcruz commented 4 years ago

you are the best! thanks

the ShapML issue is a bit concerning. One must be careful selecting and using package from GitHub. Only select packages that are actively maintained by their creators.

I found ShapML from an answer you you have to somebody else months ago. that is why I selected it :) i will report the DataFrame version upgrade to ShapML team.

I am still working on the second MLJ tutorial for you guys.

thank you