pfitzseb
commented
1 year ago Strictly speaking, this isn't really JuliaHub specific. You can repro the issue with just pkg> add DemoCards instead of dev'ing it (see below for REPL session).
I'm happy to just make the whole package dir writable, but arguably your package should handle that case on its own.
```
(@v1.8) pkg> activate --temp
Activating new project at `/tmp/jl_vdlyFW`
(jl_vdlyFW) pkg> add DemoCards
<...>
shell> cd /home/pfitzseb/.julia/packages/DemoCards/tfzL5/docs/
/home/pfitzseb/.julia/packages/DemoCards/tfzL5/docs
shell> chmod +x Project.toml
(jl_vdlyFW) pkg> activate .
Activating project at `~/.julia/packages/DemoCards/tfzL5/docs`
(docs) pkg> dev ..
<...>
(docs) pkg> instantiate
Precompiling project...
14 dependencies successfully precompiled in 29 seconds. 149 already precompiled.
julia> include("make.jl")
[ Info: SetupDemoCardsDirectory: setting up "quickstart" directory.
┌ Error: Errors when building demo dir
│ pwd = "/home/pfitzseb/.julia/packages/DemoCards/tfzL5/docs"
│ source = "quickstart"
│ root = "/home/pfitzseb/.julia/packages/DemoCards/tfzL5/docs"
│ src = "src"
└ @ DemoCards ~/.julia/packages/DemoCards/tfzL5/src/generate.jl:237
ERROR: LoadError: SystemError: opening file "/home/pfitzseb/.julia/packages/DemoCards/tfzL5/docs/src/quickstart/usage_example/basics/hidden_card.jl": Permission denied
Stacktrace:
[1] systemerror(p::String, errno::Int32; extrainfo::Nothing)
@ Base ./error.jl:176
[2] #systemerror#80
@ ./error.jl:175 [inlined]
[3] systemerror
@ ./error.jl:175 [inlined]
[4] open(fname::String; lock::Bool, read::Nothing, write::Nothing, create::Nothing, truncate::Bool, append::Nothing)
@ Base ./iostream.jl:293
[5] open(fname::String, mode::String; lock::Bool)
@ Base ./iostream.jl:356
[6] open(fname::String, mode::String)
@ Base ./iostream.jl:355
[7] open(::Base.var"#383#384"{String, Tuple{String}}, ::String, ::Vararg{String}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Base ./io.jl:382
[8] open
@ ./io.jl:381 [inlined]
[9] write
@ ./io.jl:448 [inlined]
[10] save_democards(card_dir::String, card::DemoCards.JuliaDemoCard; credit::Bool, nbviewer_root_url::String, project_dir::String, src::String, throw_error::Bool, properties::Dict{String, Any}, kwargs::Base.Pairs{Symbol, String, Tuple{Symbol}, NamedTuple{(:project_root,), Tuple{String}}})
@ DemoCards ~/.julia/packages/DemoCards/tfzL5/src/types/julia.jl:219
[11] (::Base.Broadcast.var"#41#42"{Base.Pairs{Symbol, Any, NTuple{6, Symbol}, NamedTuple{(:properties, :project_root, :src, :credit, :nbviewer_root_url, :throw_error), Tuple{Dict{String, Any}, String, String, Bool, String, Bool}}}, typeof(DemoCards.save_democards)})(::String, ::Vararg{Any})
@ Base.Broadcast ./broadcast.jl:1284
[12] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[13] _broadcast_getindex
@ ./broadcast.jl:643 [inlined]
[14] getindex
@ ./broadcast.jl:597 [inlined]
[15] copyto_nonleaf!(dest::Vector{Int64}, bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Tuple{Base.OneTo{Int64}}, Base.Broadcast.var"#41#42"{Base.Pairs{Symbol, Any, NTuple{6, Symbol}, NamedTuple{(:properties, :project_root, :src, :credit, :nbviewer_root_url, :throw_error), Tuple{Dict{String, Any}, String, String, Bool, String, Bool}}}, typeof(DemoCards.save_democards)}, Tuple{Base.RefValue{String}, Base.Broadcast.Extruded{Vector{DemoCards.AbstractDemoCard}, Tuple{Bool}, Tuple{Int64}}}}, iter::Base.OneTo{Int64}, state::Int64, count::Int64)
@ Base.Broadcast ./broadcast.jl:1055
[16] copy
@ ./broadcast.jl:907 [inlined]
[17] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, Base.Broadcast.var"#41#42"{Base.Pairs{Symbol, Any, NTuple{6, Symbol}, NamedTuple{(:properties, :project_root, :src, :credit, :nbviewer_root_url, :throw_error), Tuple{Dict{String, Any}, String, String, Bool, String, Bool}}}, typeof(DemoCards.save_democards)}, Tuple{Base.RefValue{String}, Vector{DemoCards.AbstractDemoCard}}})
@ Base.Broadcast ./broadcast.jl:860
[18] save_democards(root::String, sec::DemoCards.DemoSection; properties::Dict{String, Any}, kwargs::Base.Pairs{Symbol, Any, NTuple{5, Symbol}, NamedTuple{(:project_root, :src, :credit, :nbviewer_root_url, :throw_error), Tuple{String, String, Bool, String, Bool}}})
@ DemoCards ~/.julia/packages/DemoCards/tfzL5/src/generate.jl:396
[19] #41
@ ./broadcast.jl:1284 [inlined]
[20] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[21] _broadcast_getindex
@ ./broadcast.jl:643 [inlined]
[22] getindex
@ ./broadcast.jl:597 [inlined]
[23] copy
@ ./broadcast.jl:899 [inlined]
[24] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{1}, Nothing, Base.Broadcast.var"#41#42"{Base.Pairs{Symbol, Any, NTuple{6, Symbol}, NamedTuple{(:properties, :project_root, :src, :credit, :nbviewer_root_url, :throw_error), Tuple{Dict{String, Any}, String, String, Bool, String, Bool}}}, typeof(DemoCards.save_democards)}, Tuple{Base.RefValue{String}, Vector{DemoCards.DemoSection}}})
@ Base.Broadcast ./broadcast.jl:860
[25] save_democards(root::String, sec::DemoCards.DemoSection; properties::Dict{String, Any}, kwargs::Base.Pairs{Symbol, Any, NTuple{5, Symbol}, NamedTuple{(:project_root, :src, :credit, :nbviewer_root_url, :throw_error), Tuple{String, String, Bool, String, Bool}}})
@ DemoCards ~/.julia/packages/DemoCards/tfzL5/src/generate.jl:394
[26] #41
@ ./broadcast.jl:1284 [inlined]
[27] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[28] _broadcast_getindex
@ ./broadcast.jl:643 [inlined]
[29] getindex
@ ./broadcast.jl:597 [inlined]
[30] copy
@ ./broadcast.jl:899 [inlined]
[31] materialize
@ ./broadcast.jl:860 [inlined]
[32] save_democards(root::String, page::DemoCards.DemoPage; kwargs::Base.Pairs{Symbol, Any, NTuple{5, Symbol}, NamedTuple{(:project_root, :src, :credit, :nbviewer_root_url, :throw_error), Tuple{String, String, Bool, String, Bool}}})
@ DemoCards ~/.julia/packages/DemoCards/tfzL5/src/generate.jl:389
[33] makedemos(source::String, templates::Nothing; root::String, src::String, build::String, branch::String, edit_branch::String, credit::Bool, throw_error::Bool)
@ DemoCards ~/.julia/packages/DemoCards/tfzL5/src/generate.jl:192
[34] makedemos (repeats 2 times)
@ ~/.julia/packages/DemoCards/tfzL5/src/generate.jl:88 [inlined]
[35] top-level scope
@ ~/.julia/packages/DemoCards/tfzL5/docs/make.jl:5
[36] include(fname::String)
@ Base.MainInclude ./client.jl:476
[37] top-level scope
@ REPL[8]:1
in expression starting at /home/pfitzseb/.julia/packages/DemoCards/tfzL5/docs/make.jl:5
```
I am here because the JuliaHub documentation generation says that it is done by this package, and the "contact support" button does not appear to work for me.
In projects using
DemoCards.jl, the docs builds on JuliaHub appear to fail due to a bad writing permission (which is necessary for creating the demo cards during the build process). I have two projects depending on it, and it appears that theDemoCards.jldocs fail for the same reason. The logs for these projects are:Other packages that I see that depend on it, such as the great
Plots.jlpackage, appear to circumvent the problem by redirecting the "read on JuliaHub" button to their own hosted docs, which I cannot for the life of me figure out where the setting for this is.Regardless, the logs for each project share the write permission error within the docs directory with a similar error:
The line in question is 471: "SystemError: opening file "/juliateam/.julia/packages/ClusterValidityIndices/UT9rS/docs/src/examples/basic-examples/cvi-example.jl": Permission denied"
Is the write permission and subsequent error on the side of
DocumentationGenerator.jlor a setting in JuliaHub? If it is on the JuliaHub side, is there documentation to show how to change some permissions setting, or is it out of our hands? Thanks for your time.