JuliaDynamics / TransferEntropy.jl

Transfer entropy (conditional mutual information) estimators for the Julia language
https://juliadynamics.github.io/CausalityTools.jl/stable/
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New API #58

Closed kahaaga closed 3 years ago

kahaaga commented 3 years ago

New, more flexible and simplified interface based on Entropies.jl.

This is work in progress.

Documentation is generated here until PR is merged. Then, I'll move docs to CausalityTools.jl.

codecov-io commented 3 years ago

Codecov Report

:exclamation: No coverage uploaded for pull request base (master@742c825). Click here to learn what that means. The diff coverage is 44.59%.

Impacted file tree graph

@@            Coverage Diff            @@
##             master      #58   +/-   ##
=========================================
  Coverage          ?   39.45%           
=========================================
  Files             ?       15           
  Lines             ?      588           
  Branches          ?        0           
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  Hits              ?      232           
  Misses            ?      356           
  Partials          ?        0           
Impacted Files Coverage Δ
src/TransferEntropy.jl 100.00% <ø> (ø)
src/estimators/old_code/common_interface.jl 0.00% <0.00%> (ø)
...stimators/old_code/nearestneighbourMI_estimator.jl 0.00% <0.00%> (ø)
src/estimators/old_code/transferentropy_kraskov.jl 0.00% <0.00%> (ø)
...ators/old_code/transferentropy_transferoperator.jl 0.00% <0.00%> (ø)
...ld_code/transferentropy_transferoperator_triang.jl 0.00% <0.00%> (ø)
...c/estimators/old_code/transferentropy_visitfreq.jl 0.00% <0.00%> (ø)
src/transferentropy/utils.jl 43.66% <43.66%> (ø)
src/mutualinfo/interface.jl 80.00% <80.00%> (ø)
src/transferentropy/hilbert.jl 85.71% <85.71%> (ø)
... and 5 more

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