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JuliaGraphics / Immerse.jl

Dive deeper into your data with interactive graphics
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Lots of deprecations for Julia 0.4.0 #18

Closed lewisl closed 8 years ago

lewisl commented 9 years ago

Mostly Base.Uint8 should be new UInt8. Others. Just Pkg.add() then using... and you'll see them. On Mac OS X El Capitan.

lewisl commented 9 years ago

Actually, it's worse than that. Precompile fails.

timholy commented 9 years ago

Better to paste your output---there's nothing I can do with this as a bug report.

The only Uint8 deprecations that I experience myself are from the gen folder in Gtk.jl, and I'm unclear on how to regenerate those files (CC @vtjnash). However, it's possible I'm running master on some package that needs to be tagged, in which case pasting your output would help me figure out which one that is.

timholy commented 9 years ago

(Also, precompile works fine for me.)

lewisl commented 9 years ago

You are right the problem appears to be with gtk. This output isn't as long as the first time. I tried to Pkg.rm everything but a variety of detritus remains in various caches--to make it "easier" next time. What to do about gtk? This is the problem with deep OSS dependency stacks...

julia> Pkg.add("Plots") INFO: Installing Plots v0.4.1 INFO: Package database updated

julia> Pkg.add("Immerse") INFO: Installing Gtk v0.9.2 INFO: Installing GtkUtilities v0.0.6 INFO: Installing Immerse v0.0.8 INFO: Building Homebrew remote: Counting objects: 119, done. remote: Compressing objects: 100% (43/43), done. remote: Total 119 (delta 92), reused 99 (delta 72), pack-reused 0 Receiving objects: 100% (119/119), 15.18 KiB | 0 bytes/s, done. Resolving deltas: 100% (92/92), completed with 23 local objects. From https://github.com/Homebrew/homebrew e37f843..9133034 master -> origin/master HEAD is now at 9133034 leafnode: fix runtime issues HEAD is now at ce3d0c3 Merge pull request #78 from staticfloat/staging INFO: Building Cairo INFO: Building Gtk INFO: Package database updated

julia> Using Plots ERROR: syntax: extra token "Plots" after end of expression

julia> using Plots INFO: Recompiling stale cache file /Users/lewislevinmbr/.julia/lib/v0.4/Plots.ji for module Plots.

julia> using Immerse INFO: Recompiling stale cache file /Users/lewislevinmbr/.julia/lib/v0.4/Cairo.ji for module Cairo. INFO: Recompiling stale cache file /Users/lewislevinmbr/.julia/lib/v0.4/Compose.ji for module Compose. INFO: Recompiling stale cache file /Users/lewislevinmbr/.julia/lib/v0.4/Gadfly.ji for module Gadfly. WARNING: eval from module Compose to Gadfly:
Expr(:import, :Patchwork)::Any \ incremental compilation may be broken for this module **

INFO: Recompiling stale cache file /Users/lewislevinmbr/.julia/lib/v0.4/Immerse.ji for module Immerse. INFO: Recompiling stale cache file /Users/lewislevinmbr/.julia/lib/v0.4/GtkUtilities.ji for module GtkUtilities. INFO: Recompiling stale cache file /Users/lewislevinmbr/.julia/lib/v0.4/Gtk.ji for module Gtk. 2015-10-27 10:01:39.749 julia[18337:52729] * WARNING: Method userSpaceScaleFactor in class NSView is deprecated on 10.7 and later. It should not be used in new applications. Use convertRectToBacking: instead. WARNING: Base.Uint8 is deprecated, use UInt8 instead. likely near /Users/lewislevinmbr/.julia/v0.4/GtkUtilities/src/link.jl:110 WARNING: Base.Uint8 is deprecated, use UInt8 instead. likely near /Users/lewislevinmbr/.julia/v0.4/GtkUtilities/src/link.jl:110 WARNING: Base.Uint8 is deprecated, use UInt8 instead. likely near /Users/lewislevinmbr/.julia/v0.4/GtkUtilities/src/link.jl:110 WARNING: Base.Uint8 is deprecated, use UInt8 instead. likely near /Users/lewislevinmbr/.julia/v0.4/GtkUtilities/src/link.jl:110 WARNING: Base.Uint8 is deprecated, use UInt8 instead. likely near /Users/lewislevinmbr/.julia/v0.4/GtkUtilities/src/link.jl:110 2015-10-27 10:01:42.096 julia[18336:52710] * WARNING: Method userSpaceScaleFactor in class NSView is deprecated on 10.7 and later. It should not be used in new applications. Use convertRectToBacking: instead. WARNING: Method definition draw(Compose.Backend, Compose.Context) in module Compose at /Users/lewislevinmbr/.julia/v0.4/Compose/src/container.jl:404 overwritten in module Immerse at /Users/lewislevinmbr/.julia/v0.4/Immerse/src/compose.jl:33. WARNING: Method definition display(Base.REPL.REPLDisplay, Base.Multimedia.MIME{:text/html}, Gadfly.Plot) in module Gadfly at /Users/lewislevinmbr/.julia/v0.4/Gadfly/src/Gadfly.jl:969 overwritten in module Immerse at /Users/lewislevinmbr/.julia/v0.4/Immerse/src/display_gadfly.jl:144. 2015-10-27 10:01:49.439 julia[14712:40502] *\ WARNING: Method userSpaceScaleFactor in class NSView is deprecated on 10.7 and later. It should not be used in new applications. Use convertRectToBacking: instead. WARNING: Method definition display(Base.REPL.REPLDisplay{R<:Base.REPL.AbstractREPL}, Base.Multimedia.MIME{:text/html}, Gadfly.Plot) in module Gadfly at /Users/lewislevinmbr/.julia/v0.4/Gadfly/src/Gadfly.jl:969 overwritten in module Immerse at /Users/lewislevinmbr/.julia/v0.4/Immerse/src/display_gadfly.jl:144. WARNING: Method definition draw(Compose.Backend, Compose.Context) in module Compose at /Users/lewislevinmbr/.julia/v0.4/Compose/src/container.jl:404 overwritten in module Immerse at /Users/lewislevinmbr/.julia/v0.4/Immerse/src/compose.jl:33.

julia> gadfly() Plots.GadflyPackage()

julia> scatter([1,2,3,4],[1,2,3,4]) [Plots.jl] Initializing backend: gadfly

(:14712): GLib-GObject-WARNING **: The property GtkToolButton:stock-id is deprecated and shouldn't be used anymore. It will be removed in a future version. WARNING: Base.Uint8 is deprecated, use UInt8 instead. likely near no file:0 =========> the plot window appears properly...

====== starting over in new Julia session: julia> using Plots

julia> immerse() Plots.ImmersePackage()

julia> plot(1:4) [Plots.jl] Initializing backend: immerse 2015-10-27 10:10:43.438 julia[18531:61008] *\ WARNING: Method userSpaceScaleFactor in class NSView is deprecated on 10.7 and later. It should not be used in new applications. Use convertRectToBacking: instead. WARNING: Method definition display(Base.REPL.REPLDisplay{R<:Base.REPL.AbstractREPL}, Base.Multimedia.MIME{:text/html}, Gadfly.Plot) in module Gadfly at /Users/lewislevinmbr/.julia/v0.4/Gadfly/src/Gadfly.jl:969 overwritten in module Immerse at /Users/lewislevinmbr/.julia/v0.4/Immerse/src/display_gadfly.jl:144. WARNING: Method definition draw(Compose.Backend, Compose.Context) in module Compose at /Users/lewislevinmbr/.julia/v0.4/Compose/src/container.jl:404 overwritten in module Immerse at /Users/lewislevinmbr/.julia/v0.4/Immerse/src/compose.jl:33.

(:18531): GLib-GObject-WARNING **: The property GtkToolButton:stock-id is deprecated and shouldn't be used anymore. It will be removed in a future version. WARNING: Base.Uint8 is deprecated, use UInt8 instead. likely near no file:0 =========> the plot window appears properly...

tbreloff commented 9 years ago

Looks like it started up ok, with a few dep warnings in Gtk. There are certainly some annoying warnings with Gtk on OSX... I've seen similar (at least they aren't errors ;) The method definition errors are unavoidable unless that logic is changed within core Julia, since Immerse overwrites/replaces the Gadfly methods.

Final note... you don't need the using Immerse after using Plots.

timholy commented 8 years ago

This has been fixed with the latest release.