Open grero opened 8 years ago
I'm having problems getting Immerse to work on my Mac. This is what I get:
➜ ~ julia _ _ _ _(_)_ | A fresh approach to technical computing (_) | (_) (_) | Documentation: http://docs.julialang.org _ _ _| |_ __ _ | Type "?help" for help. | | | | | | |/ _` | | | | |_| | | | (_| | | Version 0.4.6 (2016-06-19 17:16 UTC) _/ |\__'_|_|_|\__'_| | Official http://julialang.org/ release |__/ | x86_64-apple-darwin13.4.0 julia> using Immerse WARNING: New definition +(AbstractArray{T<:Any, 2}, WoodburyMatrices.SymWoodbury) at /Users/roger/.julia/v0.4/WoodburyMatrices/src/SymWoodburyMatrices.jl:106 is ambiguous with: +(DataArrays.DataArray, AbstractArray) at /Users/roger/.julia/v0.4/DataArrays/src/operators.jl:276. To fix, define +(DataArrays.DataArray{T<:Any, 2}, WoodburyMatrices.SymWoodbury) before the new definition. WARNING: New definition +(AbstractArray{T<:Any, 2}, WoodburyMatrices.SymWoodbury) at /Users/roger/.julia/v0.4/WoodburyMatrices/src/SymWoodburyMatrices.jl:106 is ambiguous with: +(DataArrays.AbstractDataArray, AbstractArray) at /Users/roger/.julia/v0.4/DataArrays/src/operators.jl:300. To fix, define +(DataArrays.AbstractDataArray{T<:Any, 2}, WoodburyMatrices.SymWoodbury) before the new definition. 2016-08-04 11:46:55.199 julia[72269:162920] *** WARNING: Method userSpaceScaleFactor in class NSView is deprecated on 10.7 and later. It should not be used in new applications. Use convertRectToBacking: instead. WARNING: Method definition display(Base.REPL.REPLDisplay{R<:Base.REPL.AbstractREPL}, Base.Multimedia.MIME{:text/html}, Gadfly.Plot) in module Gadfly at /Users/roger/.julia/v0.4/Gadfly/src/Gadfly.jl:949 overwritten in module Immerse at /Users/roger/.julia/v0.4/Immerse/src/display_gadfly.jl:162. julia> plot(x=rand(10), y=rand(10),Geom.point) 2016-08-04 11:48:14.812 julia[72269:162920] -[__NSCFType symbolicTraits]: unrecognized selector sent to instance 0x7fad1f0129f0 2016-08-04 11:48:14.821 julia[72269:162920] An uncaught exception was raised 2016-08-04 11:48:14.821 julia[72269:162920] -[__NSCFType symbolicTraits]: unrecognized selector sent to instance 0x7fad1f0129f0 2016-08-04 11:48:14.821 julia[72269:162920] ( 0 CoreFoundation 0x00007fff94a0e4f2 __exceptionPreprocess + 178 1 libobjc.A.dylib 0x00007fff9a598f7e objc_exception_throw + 48 2 CoreFoundation 0x00007fff94a781ad -[NSObject(NSObject) doesNotRecognizeSelector:] + 205 3 CoreFoundation 0x00007fff9497e571 ___forwarding___ + 1009 4 CoreFoundation 0x00007fff9497e0f8 _CF_forwarding_prep_0 + 120 5 UIFoundation 0x00007fff8e6317c0 -[__NSFontTypefaceInfo _postscriptName] + 345 6 UIFoundation 0x00007fff8e630b23 +[__NSFontTypefaceInfo typefaceInfoForPostscriptName:options:] + 949 7 UIFoundation 0x00007fff8e63756f __NSGetMetaFontInstance + 983 8 libgdk-3.0.dylib 0x000000031716ebee _gdk_quartz_screen_get_setting + 392 9 libgtk-3.dylib 0x000000031950f6dd gtk_settings_get_property + 198 10 libgobject-2.0.dylib 0x0000000316bcd0a5 g_object_get_valist + 270 11 libgobject-2.0.dylib 0x0000000316bcd513 g_object_get + 177 12 libgtk-3.dylib 0x00000003193e49ee _gtk_css_font_size_get_default + 50 13 libgtk-3.dylib 0x00000003193e5923 gtk_css_value_font_size_compute + 211 14 libgtk-3.dylib 0x00000003193efde6 gtk_css_value_initial_compute + 218 15 libgtk-3.dylib 0x0000000319402488 gtk_css_static_style_compute_value + 106 16 libgtk-3.dylib 0x00000003193f0ed8 _gtk_css_lookup_resolve + 111 17 libgtk-3.dylib 0x0000000319402406 gtk_css_static_style_new_compute + 117 18 libgtk-3.dylib 0x000000031940236e gtk_css_static_style_get_default + 84 19 libgtk-3.dylib 0x00000003193f1a82 gtk_css_node_init + 23 20 libgobject-2.0.dylib 0x0000000316bde771 g_type_create_instance + 621 21 libgobject-2.0.dylib 0x0000000316bcc4e4 g_object_new_internal + 56 22 libgobject-2.0.dylib 0x0000000316bcbf81 g_object_newv + 493 23 libgobject-2.0.dylib 0x0000000316bcbd5d g_object_new + 193 24 libgtk-3.dylib 0x000000031940987a gtk_css_widget_node_new + 30 25 libgtk-3.dylib 0x00000003195ab7d7 gtk_widget_init + 240 26 libgobject-2.0.dylib 0x0000000316bde771 g_type_create_instance + 621 27 libgobject-2.0.dylib 0x0000000316bcc4e4 g_object_new_internal + 56 28 libgobject-2.0.dylib 0x0000000316bcc3c9 g_object_new_valist + 998 29 libgobject-2.0.dylib 0x0000000316bcbd4f g_object_new + 179 30 ??? 0x000000030cf1d41e 0x0 + 13102076958 31 ??? 0x000000030cf1d338 0x0 + 13102076728 32 ??? 0x000000030cf1d275 0x0 + 13102076533 33 ??? 0x000000030cf112c3 0x0 + 13102027459 34 ??? 0x000000030cf0a249 0x0 + 13101998665 35 ??? 0x000000030cf0742c 0x0 + 13101986860 36 ??? 0x000000030cf072b1 0x0 + 13101986481 37 libjulia.dylib 0x0000000108706cf6 jl_apply_generic + 422 38 ??? 0x000000030cefb14d 0x0 + 13101936973 39 ??? 0x000000030cefafe7 0x0 + 13101936615 40 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 41 ??? 0x000000030cefa2f4 0x0 + 13101933300 42 libjulia.dylib 0x0000000108706cf6 jl_apply_generic + 422 43 ??? 0x000000030ceebd33 0x0 + 13101874483 44 ??? 0x000000030ceeb9e2 0x0 + 13101873634 45 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 46 ??? 0x000000030ceeb936 0x0 + 13101873462 47 ??? 0x000000030ceeb7f2 0x0 + 13101873138 48 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 49 ??? 0x000000030cebef51 0x0 + 13101690705 50 sys.dylib 0x0000000109c11027 julia_run_interface_18234 + 487 51 sys.dylib 0x0000000109c11090 jlcall_run_interface_18234 + 16 52 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 53 sys.dylib 0x0000000109c1a3d1 julia_run_frontend_18517 + 609 54 sys.dylib 0x0000000109c19b51 julia_run_repl_18503 + 241 55 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 56 sys.dylib 0x0000000109c2a4eb julia__start_18909 + 3563 57 sys.dylib 0x0000000109c2a7f9 jlcall__start_18909 + 9 58 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 59 julia 0x00000001086ef684 true_main + 276 60 julia 0x00000001086ef556 main + 86 61 julia 0x00000001086ee8a4 start + 52 62 ??? 0x0000000000000001 0x0 + 1 ) 2016-08-04 11:48:14.822 julia[72269:162920] *** Terminating app due to uncaught exception 'NSInvalidArgumentException', reason: '-[__NSCFType symbolicTraits]: unrecognized selector sent to instance 0x7fad1f0129f0' *** First throw call stack: ( 0 CoreFoundation 0x00007fff94a0e4f2 __exceptionPreprocess + 178 1 libobjc.A.dylib 0x00007fff9a598f7e objc_exception_throw + 48 2 CoreFoundation 0x00007fff94a781ad -[NSObject(NSObject) doesNotRecognizeSelector:] + 205 3 CoreFoundation 0x00007fff9497e571 ___forwarding___ + 1009 4 CoreFoundation 0x00007fff9497e0f8 _CF_forwarding_prep_0 + 120 5 UIFoundation 0x00007fff8e6317c0 -[__NSFontTypefaceInfo _postscriptName] + 345 6 UIFoundation 0x00007fff8e630b23 +[__NSFontTypefaceInfo typefaceInfoForPostscriptName:options:] + 949 7 UIFoundation 0x00007fff8e63756f __NSGetMetaFontInstance + 983 8 libgdk-3.0.dylib 0x000000031716ebee _gdk_quartz_screen_get_setting + 392 9 libgtk-3.dylib 0x000000031950f6dd gtk_settings_get_property + 198 10 libgobject-2.0.dylib 0x0000000316bcd0a5 g_object_get_valist + 270 11 libgobject-2.0.dylib 0x0000000316bcd513 g_object_get + 177 12 libgtk-3.dylib 0x00000003193e49ee _gtk_css_font_size_get_default + 50 13 libgtk-3.dylib 0x00000003193e5923 gtk_css_value_font_size_compute + 211 14 libgtk-3.dylib 0x00000003193efde6 gtk_css_value_initial_compute + 218 15 libgtk-3.dylib 0x0000000319402488 gtk_css_static_style_compute_value + 106 16 libgtk-3.dylib 0x00000003193f0ed8 _gtk_css_lookup_resolve + 111 17 libgtk-3.dylib 0x0000000319402406 gtk_css_static_style_new_compute + 117 18 libgtk-3.dylib 0x000000031940236e gtk_css_static_style_get_default + 84 19 libgtk-3.dylib 0x00000003193f1a82 gtk_css_node_init + 23 20 libgobject-2.0.dylib 0x0000000316bde771 g_type_create_instance + 621 21 libgobject-2.0.dylib 0x0000000316bcc4e4 g_object_new_internal + 56 22 libgobject-2.0.dylib 0x0000000316bcbf81 g_object_newv + 493 23 libgobject-2.0.dylib 0x0000000316bcbd5d g_object_new + 193 24 libgtk-3.dylib 0x000000031940987a gtk_css_widget_node_new + 30 25 libgtk-3.dylib 0x00000003195ab7d7 gtk_widget_init + 240 26 libgobject-2.0.dylib 0x0000000316bde771 g_type_create_instance + 621 27 libgobject-2.0.dylib 0x0000000316bcc4e4 g_object_new_internal + 56 28 libgobject-2.0.dylib 0x0000000316bcc3c9 g_object_new_valist + 998 29 libgobject-2.0.dylib 0x0000000316bcbd4f g_object_new + 179 30 ??? 0x000000030cf1d41e 0x0 + 13102076958 31 ??? 0x000000030cf1d338 0x0 + 13102076728 32 ??? 0x000000030cf1d275 0x0 + 13102076533 33 ??? 0x000000030cf112c3 0x0 + 13102027459 34 ??? 0x000000030cf0a249 0x0 + 13101998665 35 ??? 0x000000030cf0742c 0x0 + 13101986860 36 ??? 0x000000030cf072b1 0x0 + 13101986481 37 libjulia.dylib 0x0000000108706cf6 jl_apply_generic + 422 38 ??? 0x000000030cefb14d 0x0 + 13101936973 39 ??? 0x000000030cefafe7 0x0 + 13101936615 40 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 41 ??? 0x000000030cefa2f4 0x0 + 13101933300 42 libjulia.dylib 0x0000000108706cf6 jl_apply_generic + 422 43 ??? 0x000000030ceebd33 0x0 + 13101874483 44 ??? 0x000000030ceeb9e2 0x0 + 13101873634 45 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 46 ??? 0x000000030ceeb936 0x0 + 13101873462 47 ??? 0x000000030ceeb7f2 0x0 + 13101873138 48 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 49 ??? 0x000000030cebef51 0x0 + 13101690705 50 sys.dylib 0x0000000109c11027 julia_run_interface_18234 + 487 51 sys.dylib 0x0000000109c11090 jlcall_run_interface_18234 + 16 52 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 53 sys.dylib 0x0000000109c1a3d1 julia_run_frontend_18517 + 609 54 sys.dylib 0x0000000109c19b51 julia_run_repl_18503 + 241 55 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 56 sys.dylib 0x0000000109c2a4eb julia__start_18909 + 3563 57 sys.dylib 0x0000000109c2a7f9 jlcall__start_18909 + 9 58 libjulia.dylib 0x0000000108706c83 jl_apply_generic + 307 59 julia 0x00000001086ef684 true_main + 276 60 julia 0x00000001086ef556 main + 86 61 julia 0x00000001086ee8a4 start + 52 62 ??? 0x0000000000000001 0x0 + 1 ) libc++abi.dylib: terminating with uncaught exception of type NSException signal (6): Abort trap: 6 __pthread_kill at /usr/lib/system/libsystem_kernel.dylib (unknown line) [1] 72269 abort julia
Versioninfo and Pkg.status():
julia> versioninfo() Julia Version 0.4.6 Commit 2e358ce (2016-06-19 17:16 UTC) Platform Info: System: Darwin (x86_64-apple-darwin13.4.0) CPU: Intel(R) Core(TM) i5-5257U CPU @ 2.70GHz WORD_SIZE: 64 BLAS: libopenblas (USE64BITINT DYNAMIC_ARCH NO_AFFINITY Haswell) LAPACK: libopenblas64_ LIBM: libopenlibm LLVM: libLLVM-3.3
julia> Pkg.status() WARNING: unknown GLM commit dc0dcebc, metadata may be ahead of package cache WARNING: unknown GLM commit bd1a03a2, metadata may be ahead of package cache WARNING: unknown GLM commit a772ce48, metadata may be ahead of package cache WARNING: unknown GLM commit 9a734eb3, metadata may be ahead of package cache WARNING: unknown PlotUtils commit 681b291a, metadata may be ahead of package cache WARNING: unknown PlotUtils commit e2f421de, metadata may be ahead of package cache WARNING: unknown PlotUtils commit ada3c997, metadata may be ahead of package cache WARNING: unknown PlotUtils commit c8d84fe3, metadata may be ahead of package cache 34 required packages: - ArgParse 0.3.1 - Atom 0.4.2+ julia-0.4 - Compose 0.4.2+ roger (dirty) - DSP 0.0.11 - DataFramesMeta 0.1.3 - Distances 0.3.2 - FastAnonymous 0.3.2 - Fontconfig 0.0.2 - GLM 0.5.0+ vonmises (dirty) - GLVisualize 0.0.10 - GR 0.14.0 - Gadfly 0.4.2+ roger (dirty) - Gtk 0.10.1 - Julia 1.1.10 - Images 0.5.7 - Immerse 0.0.11 - JLD 0.6.3 - KernelEstimator 0.1.7 - LARS 0.0.3 - LibGit2 0.3.8 - Lint 0.2.4 - MAT 0.2.14 - MATLAB 0.2.4+ master - MultivariateStats 0.3.0 - ODE 0.2.1+ master - ProfileView 0.1.3 - ProgressMeter 0.3.2 - PyPlot 2.2.0 - QuartzImageIO 0.1.2 - Datasets 0.1.3 - Requests 0.3.9 - TerminalExtensions 0.0.3 - VennEuler 0.0.1+ master - Winston 0.10.2+ roger (dirty) 118 additional packages: - ArrayViews 0.6.4 - BinDeps 0.4.2 - Blink 0.3.4 - Blosc 0.1.6 - BufferedStreams 0.1.6 - Cairo 0.2.33 - Calculus 0.1.15 - CodeTools 0.3.0+ master - Codecs 0.1.5 - ColorTypes 0.2.5 - ColorVectorSpace 0.1.5 - Colors 0.6.6 - Compat 0.8.6 - Conda 0.2.2 - Connectivity 0.0.0- devel (unregistered, dirty) - Contour 0.1.0 - Cubature 1.2.0 - DataArrays 0.3.8 - DataFrames 0.7.6 - DataStructures 0.4.5 - Dates 0.4.4 - Debug 0.1.6 - Decoding 0.0.0- master (unregistered, dirty) - DirectedInformation 0.0.0- master (unregistered, dirty) - DirectionalRegression 0.0.0- master (unregistered) - Distributions 0.8.10 77eea93c (dirty) - Docile 0.5.23 - DualNumbers 0.2.2 - Entropies 0.0.0- master (unregistered, dirty) - Eyelink 0.0.0- d310a385 (unregistered) - FactCheck 0.4.3 - FileIO 0.1.0 - FixedPointNumbers 0.1.4 - FixedSizeArrays 0.2.2 - ForwardDiff 0.2.2 - FreeType 1.0.3 - GLAbstraction 0.1.0 - GLFW 1.1.3 - GLWindow 0.1.4 - GUICheck 0.0.0- master (unregistered) - Gzip 0.2.19 - GeometryTypes 0.1.6 - Graphics 0.1.3 - Grid 0.4.1 - GtkInteract 0.0.0- master (unregistered) - GtkUtilities 0.0.9 - HDF5 0.6.4 - Hexagons 0.0.4 - Hiccup 0.0.3 - Homebrew 0.3.3 master - HttpCommon 0.2.6 - HttpParser 0.1.1 - HttpServer 0.1.5 - HypothesisTests 0.2.10+ roger - IniFile 0.2.5 - Interact 0.3.1+ master - Iterators 0.1.9 - JSON 0.6.0 - JuliaParser 0.6.4 - KernelDensity 0.1.2 - LNR 0.0.2 - LaTeXStrings 0.2.0 - Lazy 0.10.1 - LegacyStrings 0.1.1 - Libz 0.2.0 - Loess 0.0.6 - MacroTools 0.3.0 - MathProgBase 0.5.1 - MbedTLS 0.2.5 - Measures 0.0.3 - Media 0.1.2 - MeshIO 0.0.5 - ModernGL 0.0.8 - Mustache 0.0.15 - Mux 0.2.0 - NLopt 0.3.2 - NaNMath 0.2.1 - Nettle 0.2.3 - Optim 0.5.0 - PDMats 0.4.2 - Packing 0.0.4 - PeakFinder 0.0.0- master (unregistered, dirty) - PeriStimulusTimeHistograms 0.0.0- master (unregistered) - PlotUtils 0.0.0- master - Polynomials 0.0.5 - PositiveFactorizations 0.0.2 - Primes 0.1.1 - PyCall 1.7.0 - Quaternions 0.1.1 - Reactive 0.3.4 - Reexport 0.0.3 - RenyiEntropyEstimator 0.0.0- master (unregistered, dirty) - Requires 0.2.2 - ResponseLatency 0.0.0- master (unregistered) - RobustRegression 0.0.0- master (unregistered) - Roots 0.2.0 - SHA 0.2.0 - SIUnits 0.0.6 - SaccadeAnalysis 0.0.0- master (unregistered, dirty) - ShiftData 0.0.0- master (unregistered) - Showoff 0.0.7 - SignedDistanceFields 0.0.1 - SortingAlgorithms 0.1.0 - Spiketrains 0.0.0- master (unregistered, dirty) - StatUtils 0.0.0- master (unregistered) - StatsBase 0.8.3 - StatsFuns 0.2.2 - Stimulus 0.0.0- jv0.4 (unregistered, dirty) - TexExtensions 0.0.3 - TextWrap 0.1.6 - Tk 0.3.8 - URIParser 0.1.5 - VennDiagrams 0.0.0- roger (unregistered, dirty) - WebSockets 0.1.2 - WoodburyMatrices 0.2.0 - Yeppp 0.0.10 - ZMQ 0.3.2 - Zlib 0.1.12
have you tried julia 0.5?
bjarthur
commented
7 years ago bjarthur
commented
7 years ago
I'm having problems getting Immerse to work on my Mac. This is what I get:
Versioninfo and Pkg.status():