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JuliaGraphics / Winston.jl

2D plotting for Julia
MIT License
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It is not working on Pluto #309

Closed diegozea closed 3 years ago

diegozea commented 3 years ago

Loading Winston never ends on Pluto (note the 580 seconds):

Screenshot from 2021-09-10 18-25-50

The only message in the REPL is:

      From worker 5:    Gtk-Message: 18:16:10.765: Failed to load module "canberra-gtk-module"
      From worker 5:    Gtk-Message: 18:16:10.766: Failed to load module "canberra-gtk-module"

Then, interrupting the cell and re-running it, causes Winston to work:

Screenshot from 2021-09-10 18-30-19

The message in the REPL is:

[ Info: Sending interrupt to process 5
Still running... starting sequence
 🔥  🔥  🔥  🔥  🔥       From worker 5: WARNING: Force throwing a SIGINT
      From worker 5:    FATAL ERROR: Gtk state corrupted by error thrown in a callback:
      From worker 5:    ERROR: InterruptException:
      From worker 5:    Stacktrace:
      From worker 5:     [1] (::Gtk.var"#247#248")()
      From worker 5:       @ Gtk ~/.julia/packages/Gtk/jLULV/src/events.jl:2
      From worker 5:     [2] g_sigatom(f::Any)
      From worker 5:       @ Gtk.GLib ~/.julia/packages/Gtk/jLULV/src/GLib/signals.jl:175
      From worker 5:     [3] gtk_main()
      From worker 5:       @ Gtk ~/.julia/packages/Gtk/jLULV/src/events.jl:1
      From worker 5:

Could that be caused by Pluto using Distributed?

I really appreciate any help you can provide.

Best,

diegozea commented 3 years ago

Ok, it looks like the problem only happens when PyPlot and Winston are imported in the same notebook. Winston 0.15.2 works perfect on Pluto 0.16.0 (Julia 1.6.2):

Screenshot from 2021-09-11 00-16-59

### A Pluto.jl notebook ###
# v0.16.0

using Markdown
using InteractiveUtils

# ╔═╡ 70cc64ad-81b3-4115-978a-14a88c2878fc
import Pkg

# ╔═╡ 8b827074-7c82-45a9-aad2-a0cb0b18f724
md"""
## Winston
"""

# ╔═╡ 3a5b89c0-d2e7-4448-9884-3a8379515cd2
x = range(0, 2pi, length=100)

# ╔═╡ ca991877-8b1c-403b-97ed-e01553ba6933
y = sin.(x)

# ╔═╡ cafdf0bc-1b8a-412d-9f00-4309b5aa1540
import Winston

# ╔═╡ ce50d29a-ca74-45a8-b637-e7b58a643b6c
Winston.plot(x, y, "-")

# ╔═╡ 2ca1b6a6-d967-4713-9ad7-5c70d8333a20
versioninfo(verbose=true)

# ╔═╡ 248deebd-7225-49c8-95ed-9b199f9a135a
Pkg.status()

# ╔═╡ 00000000-0000-0000-0000-000000000001
PLUTO_PROJECT_TOML_CONTENTS = """
[deps]
Pkg = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
Winston = "bd07be1c-e76f-5ff0-9c0b-f51ef45303c6"

[compat]
Winston = "~0.15.2"
"""

# ╔═╡ 00000000-0000-0000-0000-000000000002
PLUTO_MANIFEST_TOML_CONTENTS = """
# This file is machine-generated - editing it directly is not advised

[[ATK_jll]]
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version = "2.36.1+0"

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[[Downloads]]
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[[Expat_jll]]
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[[FixedPointNumbers]]
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[[Fontconfig_jll]]
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git-tree-sha1 = "21efd19106a55620a188615da6d3d06cd7f6ee03"
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[[FreeType2_jll]]
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git-tree-sha1 = "f2922cb0105ba076b560e3922910f8e3749aa91a"
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[[Gettext_jll]]
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git-tree-sha1 = "9b02998aba7bf074d14de89f9d37ca24a1a0b046"
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git-tree-sha1 = "7bf67e9a481712b3dbe9cb3dac852dc4b1162e02"
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[[Graphics]]
deps = ["Colors", "LinearAlgebra", "NaNMath"]
git-tree-sha1 = "2c1cf4df419938ece72de17f368a021ee162762e"
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[[Graphite2_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "344bf40dcab1073aca04aa0df4fb092f920e4011"
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[[Grisu]]
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[[Gtk]]
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[[PCRE_jll]]
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git-tree-sha1 = "b2a7af664e098055a7529ad1a900ded962bca488"
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git-tree-sha1 = "9bc1871464b12ed19297fbc56c4fb4ba84988b0d"
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[[Pixman_jll]]
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git-tree-sha1 = "b4f5d02549a10e20780a24fce72bea96b6329e29"
uuid = "30392449-352a-5448-841d-b1acce4e97dc"
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[[Pkg]]
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uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"

[[Preferences]]
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git-tree-sha1 = "00cfd92944ca9c760982747e9a1d0d5d86ab1e5a"
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[[Printf]]
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[[REPL]]
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uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"

[[Random]]
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uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"

[[Reexport]]
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[[SHA]]
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"

[[Serialization]]
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[[SharedArrays]]
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uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383"

[[Sockets]]
uuid = "6462fe0b-24de-5631-8697-dd941f90decc"

[[SortingAlgorithms]]
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version = "1.0.1"

[[SparseArrays]]
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uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[Statistics]]
deps = ["LinearAlgebra", "SparseArrays"]
uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"

[[StatsAPI]]
git-tree-sha1 = "1958272568dc176a1d881acb797beb909c785510"
uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
version = "1.0.0"

[[StatsBase]]
deps = ["DataAPI", "DataStructures", "LinearAlgebra", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
git-tree-sha1 = "8cbbc098554648c84f79a463c9ff0fd277144b6c"
uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
version = "0.33.10"

[[TOML]]
deps = ["Dates"]
uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"

[[Tar]]
deps = ["ArgTools", "SHA"]
uuid = "a4e569a6-e804-4fa4-b0f3-eef7a1d5b13e"

[[Test]]
deps = ["InteractiveUtils", "Logging", "Random", "Serialization"]
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[UUIDs]]
deps = ["Random", "SHA"]
uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"

[[Unicode]]
uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"

[[Wayland_jll]]
deps = ["Artifacts", "Expat_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Pkg", "XML2_jll"]
git-tree-sha1 = "3e61f0b86f90dacb0bc0e73a0c5a83f6a8636e23"
uuid = "a2964d1f-97da-50d4-b82a-358c7fce9d89"
version = "1.19.0+0"

[[Wayland_protocols_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll"]
git-tree-sha1 = "2839f1c1296940218e35df0bbb220f2a79686670"
uuid = "2381bf8a-dfd0-557d-9999-79630e7b1b91"
version = "1.18.0+4"

[[Winston]]
deps = ["Cairo", "Colors", "Compat", "Dates", "Graphics", "Grisu", "Gtk", "IniFile", "LinearAlgebra", "NaNMath", "Pkg", "Printf", "REPL", "Random", "Reexport", "SparseArrays", "StatsBase"]
git-tree-sha1 = "35123ccb45e319ab6068a20be0ef9f358c116c8d"
uuid = "bd07be1c-e76f-5ff0-9c0b-f51ef45303c6"
version = "0.15.2"

[[XML2_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Libiconv_jll", "Pkg", "Zlib_jll"]
git-tree-sha1 = "1acf5bdf07aa0907e0a37d3718bb88d4b687b74a"
uuid = "02c8fc9c-b97f-50b9-bbe4-9be30ff0a78a"
version = "2.9.12+0"

[[XSLT_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Libgcrypt_jll", "Libgpg_error_jll", "Libiconv_jll", "Pkg", "XML2_jll", "Zlib_jll"]
git-tree-sha1 = "91844873c4085240b95e795f692c4cec4d805f8a"
uuid = "aed1982a-8fda-507f-9586-7b0439959a61"
version = "1.1.34+0"

[[Xorg_libX11_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxcb_jll", "Xorg_xtrans_jll"]
git-tree-sha1 = "5be649d550f3f4b95308bf0183b82e2582876527"
uuid = "4f6342f7-b3d2-589e-9d20-edeb45f2b2bc"
version = "1.6.9+4"

[[Xorg_libXau_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4e490d5c960c314f33885790ed410ff3a94ce67e"
uuid = "0c0b7dd1-d40b-584c-a123-a41640f87eec"
version = "1.0.9+4"

[[Xorg_libXcomposite_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll"]
git-tree-sha1 = "7c688ca9c957837539bbe1c53629bb871025e423"
uuid = "3c9796d7-64a0-5134-86ad-79f8eb684845"
version = "0.4.5+4"

[[Xorg_libXcursor_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll", "Xorg_libXrender_jll"]
git-tree-sha1 = "12e0eb3bc634fa2080c1c37fccf56f7c22989afd"
uuid = "935fb764-8cf2-53bf-bb30-45bb1f8bf724"
version = "1.2.0+4"

[[Xorg_libXdamage_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXfixes_jll"]
git-tree-sha1 = "fe4ffb2024ba3eddc862c6e1d70e2b070cd1c2bf"
uuid = "0aeada51-83db-5f97-b67e-184615cfc6f6"
version = "1.1.5+4"

[[Xorg_libXdmcp_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "4fe47bd2247248125c428978740e18a681372dd4"
uuid = "a3789734-cfe1-5b06-b2d0-1dd0d9d62d05"
version = "1.1.3+4"

[[Xorg_libXext_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "b7c0aa8c376b31e4852b360222848637f481f8c3"
uuid = "1082639a-0dae-5f34-9b06-72781eeb8cb3"
version = "1.3.4+4"

[[Xorg_libXfixes_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "0e0dc7431e7a0587559f9294aeec269471c991a4"
uuid = "d091e8ba-531a-589c-9de9-94069b037ed8"
version = "5.0.3+4"

[[Xorg_libXi_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXfixes_jll"]
git-tree-sha1 = "89b52bc2160aadc84d707093930ef0bffa641246"
uuid = "a51aa0fd-4e3c-5386-b890-e753decda492"
version = "1.7.10+4"

[[Xorg_libXinerama_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll"]
git-tree-sha1 = "26be8b1c342929259317d8b9f7b53bf2bb73b123"
uuid = "d1454406-59df-5ea1-beac-c340f2130bc3"
version = "1.1.4+4"

[[Xorg_libXrandr_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXrender_jll"]
git-tree-sha1 = "34cea83cb726fb58f325887bf0612c6b3fb17631"
uuid = "ec84b674-ba8e-5d96-8ba1-2a689ba10484"
version = "1.5.2+4"

[[Xorg_libXrender_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "19560f30fd49f4d4efbe7002a1037f8c43d43b96"
uuid = "ea2f1a96-1ddc-540d-b46f-429655e07cfa"
version = "0.9.10+4"

[[Xorg_libXtst_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXext_jll", "Xorg_libXfixes_jll", "Xorg_libXi_jll"]
git-tree-sha1 = "0c0a60851f44add2a64069ddf213e941c30ed93c"
uuid = "b6f176f1-7aea-5357-ad67-1d3e565ea1c6"
version = "1.2.3+4"

[[Xorg_libpthread_stubs_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "6783737e45d3c59a4a4c4091f5f88cdcf0908cbb"
uuid = "14d82f49-176c-5ed1-bb49-ad3f5cbd8c74"
version = "0.1.0+3"

[[Xorg_libxcb_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "XSLT_jll", "Xorg_libXau_jll", "Xorg_libXdmcp_jll", "Xorg_libpthread_stubs_jll"]
git-tree-sha1 = "daf17f441228e7a3833846cd048892861cff16d6"
uuid = "c7cfdc94-dc32-55de-ac96-5a1b8d977c5b"
version = "1.13.0+3"

[[Xorg_libxkbfile_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libX11_jll"]
git-tree-sha1 = "926af861744212db0eb001d9e40b5d16292080b2"
uuid = "cc61e674-0454-545c-8b26-ed2c68acab7a"
version = "1.1.0+4"

[[Xorg_xkbcomp_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_libxkbfile_jll"]
git-tree-sha1 = "4bcbf660f6c2e714f87e960a171b119d06ee163b"
uuid = "35661453-b289-5fab-8a00-3d9160c6a3a4"
version = "1.4.2+4"

[[Xorg_xkeyboard_config_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Xorg_xkbcomp_jll"]
git-tree-sha1 = "5c8424f8a67c3f2209646d4425f3d415fee5931d"
uuid = "33bec58e-1273-512f-9401-5d533626f822"
version = "2.27.0+4"

[[Xorg_xtrans_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "79c31e7844f6ecf779705fbc12146eb190b7d845"
uuid = "c5fb5394-a638-5e4d-96e5-b29de1b5cf10"
version = "1.4.0+3"

[[Zlib_jll]]
deps = ["Libdl"]
uuid = "83775a58-1f1d-513f-b197-d71354ab007a"

[[Zstd_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "cc4bf3fdde8b7e3e9fa0351bdeedba1cf3b7f6e6"
uuid = "3161d3a3-bdf6-5164-811a-617609db77b4"
version = "1.5.0+0"

[[adwaita_icon_theme_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "hicolor_icon_theme_jll"]
git-tree-sha1 = "37c9a36ccb876e02876c8a654f1b2e8c1b443a78"
uuid = "b437f822-2cd6-5e08-a15c-8bac984d38ee"
version = "3.33.92+5"

[[at_spi2_atk_jll]]
deps = ["ATK_jll", "Artifacts", "JLLWrappers", "Libdl", "Pkg", "XML2_jll", "Xorg_libX11_jll", "at_spi2_core_jll"]
git-tree-sha1 = "f16ae690aca4761f33d2cb338ee9899e541f5eae"
uuid = "de012916-1e3f-58c2-8f29-df3ef51d412d"
version = "2.34.1+4"

[[at_spi2_core_jll]]
deps = ["Artifacts", "Dbus_jll", "Glib_jll", "JLLWrappers", "Libdl", "Pkg", "Xorg_libXtst_jll"]
git-tree-sha1 = "d2d540cd145f2b2933614649c029d222fe125188"
uuid = "0fc3237b-ac94-5853-b45c-d43d59a06200"
version = "2.34.0+4"

[[gdk_pixbuf_jll]]
deps = ["Artifacts", "Glib_jll", "JLLWrappers", "JpegTurbo_jll", "Libdl", "Libtiff_jll", "Pkg", "Xorg_libX11_jll", "libpng_jll"]
git-tree-sha1 = "0facfc4bfd873c21b83a053bbf182b9ef19c69d8"
uuid = "da03df04-f53b-5353-a52f-6a8b0620ced0"
version = "2.42.6+0"

[[hicolor_icon_theme_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "b458a6f6fc2b1a8ca74ed63852e4eaf43fb9f5ea"
uuid = "059c91fe-1bad-52ad-bddd-f7b78713c282"
version = "0.17.0+3"

[[iso_codes_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "5ee24c3ae30e006117ec2da5ea50f2ce457c019a"
uuid = "bf975903-5238-5d20-8243-bc370bc1e7e5"
version = "4.3.0+4"

[[libpng_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Zlib_jll"]
git-tree-sha1 = "94d180a6d2b5e55e447e2d27a29ed04fe79eb30c"
uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f"
version = "1.6.38+0"

[[nghttp2_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d"

[[p7zip_jll]]
deps = ["Artifacts", "Libdl"]
uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0"

[[xkbcommon_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"]
git-tree-sha1 = "ece2350174195bb31de1a63bea3a41ae1aa593b6"
uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd"
version = "0.9.1+5"
"""

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# ╠═ce50d29a-ca74-45a8-b637-e7b58a643b6c
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tknopp commented 3 years ago

This is not only an issue in Pluto but also in the REPL the last time I tried.

diegozea commented 3 years ago

In Jupyter, import Winston hangs if it is after import PyPlot, but it works if import Winston is placed first. Is it an open issue related to this problem? I guess anyway that most users do not import PyPlot and Winston in the same session...

tknopp commented 3 years ago

All this is about the libraries that are loaded and if there are any clashes. Winston uses one version of Gtk, PyPlot can use another one. This can be an issue.