Closed stefanocovino closed 1 week ago
bencardoen
commented
2 weeks ago Same here, including on 1.10.5, the Cxxwrap dependency fails. The relevant trace is
ERROR: LoadError: InitError: could not load library "/home/bcardoen/.julia/artifacts/fbe819efdc02977e6bc7cabfab4fb33665dc17d9/lib/libcxxwrap_julia.so"
/home/bcardoen/.julia/artifacts/fbe819efdc02977e6bc7cabfab4fb33665dc17d9/lib/libcxxwrap_julia.so: undefined symbol: small_typeof, version JL_LIBJULIA_1.11
ViralBShah
commented
1 week ago Fixed in #47. Should register a new version soon.
ViralBShah
commented
1 week ago Would be nice if you can try the dev version and verify.
bencardoen
commented
1 week ago @ViralBShah nvm
juliaup add 1.11
julia +1.11
julia
] dev OpenCV
using OpenCVinstalls but crashes on precompilation (Fedora 40). Perhaps I'm doing something wrong?
(@v1.11) pkg> status
Status `~/.julia/environments/v1.11/Project.toml`
[f878e3a2] OpenCV v4.6.0 `~/.julia/dev/OpenCV`Full trace
(@v1.11) pkg> dev OpenCV
Cloning git-repo `https://github.com/JuliaImages/OpenCV.jl.git`
Resolving package versions...
Installed CxxWrap ────────────── v0.16.0
Installed libcxxwrap_julia_jll ─ v0.13.2+0
Downloaded artifact: OpenCV
Downloaded artifact: libcxxwrap_julia
Updating `~/.julia/environments/v1.11/Project.toml`
[f878e3a2] + OpenCV v4.6.0 `~/.julia/dev/OpenCV`
Updating `~/.julia/environments/v1.11/Manifest.toml`
[1f15a43c] + CxxWrap v0.16.0
[692b3bcd] + JLLWrappers v1.6.1
[1914dd2f] + MacroTools v0.5.13
[f878e3a2] + OpenCV v4.6.0 `~/.julia/dev/OpenCV`
[21216c6a] + Preferences v1.4.3
[6e34b625] + Bzip2_jll v1.0.8+2
[2702e6a9] + EpollShim_jll v0.0.20230411+0
[2e619515] + Expat_jll v2.6.2+0
[a3f928ae] + Fontconfig_jll v2.13.96+0
[d7e528f0] + FreeType2_jll v2.13.2+0
[78b55507] + Gettext_jll v0.21.0+0
[7746bdde] + Glib_jll v2.80.5+0
⌅ [e9f186c6] + Libffi_jll v3.2.2+1
[d4300ac3] + Libgcrypt_jll v1.8.11+0
[7e76a0d4] + Libglvnd_jll v1.6.0+0
[7add5ba3] + Libgpg_error_jll v1.49.0+0
[94ce4f54] + Libiconv_jll v1.17.0+0
[4b2f31a3] + Libmount_jll v2.40.1+0
[38a345b3] + Libuuid_jll v2.40.1+0
[33b9d88c] + OpenCV_jll v4.6.0+2
⌅ [458c3c95] + OpenSSL_jll v1.1.23+1
[ea2cea3b] + Qt5Base_jll v5.15.3+2
[a2964d1f] + Wayland_jll v1.21.0+1
[2381bf8a] + Wayland_protocols_jll v1.31.0+0
[02c8fc9c] + XML2_jll v2.13.3+0
[aed1982a] + XSLT_jll v1.1.41+0
[4f6342f7] + Xorg_libX11_jll v1.8.6+0
[0c0b7dd1] + Xorg_libXau_jll v1.0.11+0
[a3789734] + Xorg_libXdmcp_jll v1.1.4+0
[1082639a] + Xorg_libXext_jll v1.3.6+0
[14d82f49] + Xorg_libpthread_stubs_jll v0.1.1+0
[c7cfdc94] + Xorg_libxcb_jll v1.17.0+0
[cc61e674] + Xorg_libxkbfile_jll v1.1.2+0
[12413925] + Xorg_xcb_util_image_jll v0.4.0+1
[2def613f] + Xorg_xcb_util_jll v0.4.0+1
[975044d2] + Xorg_xcb_util_keysyms_jll v0.4.0+1
[0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.9+1
[c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.1+1
[35661453] + Xorg_xkbcomp_jll v1.4.6+0
[33bec58e] + Xorg_xkeyboard_config_jll v2.39.0+0
[c5fb5394] + Xorg_xtrans_jll v1.5.0+0
[3eaa8342] + libcxxwrap_julia_jll v0.13.2+0
[d8fb68d0] + xkbcommon_jll v1.4.1+1
[0dad84c5] + ArgTools v1.1.2
[56f22d72] + Artifacts v1.11.0
[2a0f44e3] + Base64 v1.11.0
[ade2ca70] + Dates v1.11.0
[f43a241f] + Downloads v1.6.0
[7b1f6079] + FileWatching v1.11.0
[b27032c2] + LibCURL v0.6.4
[76f85450] + LibGit2 v1.11.0
[8f399da3] + Libdl v1.11.0
[56ddb016] + Logging v1.11.0
[d6f4376e] + Markdown v1.11.0
[ca575930] + NetworkOptions v1.2.0
[44cfe95a] + Pkg v1.11.0
[de0858da] + Printf v1.11.0
[9a3f8284] + Random v1.11.0
[ea8e919c] + SHA v0.7.0
[fa267f1f] + TOML v1.0.3
[a4e569a6] + Tar v1.10.0
[cf7118a7] + UUIDs v1.11.0
[4ec0a83e] + Unicode v1.11.0
[e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
[deac9b47] + LibCURL_jll v8.6.0+0
[e37daf67] + LibGit2_jll v1.7.2+0
[29816b5a] + LibSSH2_jll v1.11.0+1
[c8ffd9c3] + MbedTLS_jll v2.28.6+0
[14a3606d] + MozillaCACerts_jll v2023.12.12
[efcefdf7] + PCRE2_jll v10.42.0+1
[83775a58] + Zlib_jll v1.2.13+1
[8e850ede] + nghttp2_jll v1.59.0+0
[3f19e933] + p7zip_jll v17.4.0+2
Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
julia> using OpenCV
Precompiling OpenCV...
Info Given OpenCV was explicitly requested, output will be shown live
ERROR: LoadError: InitError: could not load library "/home/bcardoen/.julia/artifacts/55c9720fa4f3a61012a2311bfcf0ba4e66405dea/lib/libopencv_julia.so"
/home/bcardoen/.julia/artifacts/55c9720fa4f3a61012a2311bfcf0ba4e66405dea/lib/libopencv_julia.so: undefined symbol: small_typeof, version JL_LIBJULIA_1.11
Stacktrace:
[1] dlopen(s::String, flags::UInt32; throw_error::Bool)
@ Base.Libc.Libdl ./libdl.jl:120
[2] dlopen(s::String, flags::UInt32)
@ Base.Libc.Libdl ./libdl.jl:119
[3] macro expansion
@ ~/.julia/packages/JLLWrappers/jXOYx/src/products/library_generators.jl:63 [inlined]
[4] __init__()
@ OpenCV_jll ~/.julia/packages/OpenCV_jll/Hfsh1/src/wrappers/x86_64-linux-gnu-cxx11-julia_version+1.11.0.jl:78
[5] run_module_init(mod::Module, i::Int64)
@ Base ./loading.jl:1336
[6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
@ Base ./loading.jl:1324
[7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::String, depmods::Vector{Any}, ignore_native::Nothing; register::Bool)
@ Base ./loading.jl:1213
[8] _include_from_serialized (repeats 2 times)
@ ./loading.jl:1169 [inlined]
[9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
@ Base ./loading.jl:1985
[10] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:2450
[11] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2315
[12] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[13] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[14] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2302
[15] macro expansion
@ ./loading.jl:2241 [inlined]
[16] macro expansion
@ ./lock.jl:273 [inlined]
[17] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:2198
[18] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[19] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[20] require(into::Module, mod::Symbol)
@ Base ./loading.jl:2191
[21] include
@ ./Base.jl:557 [inlined]
[22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
@ Base ./loading.jl:2790
[23] top-level scope
@ stdin:5
during initialization of module OpenCV_jll
in expression starting at /home/bcardoen/.julia/dev/OpenCV/src/OpenCV.jl:1
in expression starting at stdin:5
✗ OpenCV
42 dependencies successfully precompiled in 16 seconds. 25 already precompiled.
ERROR: The following 1 direct dependency failed to precompile:
OpenCV
Failed to precompile OpenCV [f878e3a2-a245-4720-8660-60795d644f2a] to "/home/bcardoen/.julia/compiled/v1.11/OpenCV/jl_7W5cj8".
ERROR: LoadError: InitError: could not load library "/home/bcardoen/.julia/artifacts/55c9720fa4f3a61012a2311bfcf0ba4e66405dea/lib/libopencv_julia.so"
/home/bcardoen/.julia/artifacts/55c9720fa4f3a61012a2311bfcf0ba4e66405dea/lib/libopencv_julia.so: undefined symbol: small_typeof, version JL_LIBJULIA_1.11
Stacktrace:
[1] dlopen(s::String, flags::UInt32; throw_error::Bool)
@ Base.Libc.Libdl ./libdl.jl:120
[2] dlopen(s::String, flags::UInt32)
@ Base.Libc.Libdl ./libdl.jl:119
[3] macro expansion
@ ~/.julia/packages/JLLWrappers/jXOYx/src/products/library_generators.jl:63 [inlined]
[4] __init__()
@ OpenCV_jll ~/.julia/packages/OpenCV_jll/Hfsh1/src/wrappers/x86_64-linux-gnu-cxx11-julia_version+1.11.0.jl:78
[5] run_module_init(mod::Module, i::Int64)
@ Base ./loading.jl:1336
[6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
@ Base ./loading.jl:1324
[7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::String, depmods::Vector{Any}, ignore_native::Nothing; register::Bool)
@ Base ./loading.jl:1213
[8] _include_from_serialized (repeats 2 times)
@ ./loading.jl:1169 [inlined]
[9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
@ Base ./loading.jl:1985
[10] _require(pkg::Base.PkgId, env::String)
@ Base ./loading.jl:2450
[11] __require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2315
[12] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[13] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[14] _require_prelocked(uuidkey::Base.PkgId, env::String)
@ Base ./loading.jl:2302
[15] macro expansion
@ ./loading.jl:2241 [inlined]
[16] macro expansion
@ ./lock.jl:273 [inlined]
[17] __require(into::Module, mod::Symbol)
@ Base ./loading.jl:2198
[18] #invoke_in_world#3
@ ./essentials.jl:1089 [inlined]
[19] invoke_in_world
@ ./essentials.jl:1086 [inlined]
[20] require(into::Module, mod::Symbol)
@ Base ./loading.jl:2191
[21] include
@ ./Base.jl:557 [inlined]
[22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
@ Base ./loading.jl:2790
[23] top-level scope
@ stdin:5
during initialization of module OpenCV_jll
in expression starting at /home/bcardoen/.julia/dev/OpenCV/src/OpenCV.jl:1
in expression starting at stdin:@ViralBShah please ignore the above, I forgot to first update registry. With an
] updateit precompiles fine. Thank you for resolving this, and apologies for the noise.
Dear friends,
I have problems in installing OpenCV on a linux (debian) platform and julia 1.11.0. This is the error log I get:
julia> err PkgPrecompileError: The following 1 direct dependency failed to precompile:
OpenCV
Failed to precompile OpenCV [f878e3a2-a245-4720-8660-60795d644f2a] to "/home/stefanocovino/.julia/compiled/v1.11/OpenCV/jl_Mj1Y8s". ERROR: LoadError: InitError: could not load library "/home/stefanocovino/.julia/artifacts/fbe819efdc02977e6bc7cabfab4fb33665dc17d9/lib/libcxxwrap_julia.so" /home/stefanocovino/.julia/artifacts/fbe819efdc02977e6bc7cabfab4fb33665dc17d9/lib/libcxxwrap_julia.so: undefined symbol: small_typeof, version JL_LIBJULIA_1.11 Stacktrace: [1] dlopen(s::String, flags::UInt32; throw_error::Bool) @ Base.Libc.Libdl ./libdl.jl:120 [2] dlopen(s::String, flags::UInt32) @ Base.Libc.Libdl ./libdl.jl:119 [3] macro expansion @ ~/.julia/packages/JLLWrappers/inPJn/src/products/library_generators.jl:63 [inlined] [4] init() @ libcxxwrap_julia_jll ~/.julia/packages/libcxxwrap_julia_jll/zmDeI/src/wrappers/x86_64-linux-gnu-cxx11-julia_version+1.11.0.jl:9 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1336 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1324 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::String, depmods::Vector{Any}, ignore_native::Nothing; register::Bool) @ Base ./loading.jl:1213 [8] _include_from_serialized (repeats 2 times) @ ./loading.jl:1169 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:1975 [10] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2435 [11] require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2300 [12] #invoke_in_world#3 @ ./essentials.jl:1088 [inlined] [13] invoke_in_world @ ./essentials.jl:1085 [inlined] [14] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2287 [15] macro expansion @ ./loading.jl:2226 [inlined] [16] macro expansion @ ./lock.jl:273 [inlined] [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2183 [18] #invoke_in_world#3 @ ./essentials.jl:1088 [inlined] [19] invoke_in_world @ ./essentials.jl:1085 [inlined] [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2176 [21] include(mod::Module, _path::String) @ Base ./Base.jl:557 [22] top-level scope @ ~/.julia/packages/JLLWrappers/inPJn/src/toplevel_generators.jl:192 [23] include @ ./Base.jl:557 [inlined] [24] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2806 [25] top-level scope @ stdin:4 during initialization of module libcxxwrap_julia_jll in expression starting at /home/stefanocovino/.julia/packages/OpenCV_jll/Hfsh1/src/wrappers/x86_64-linux-gnu-cxx11-julia_version+1.11.0.jl:6 in expression starting at /home/stefanocovino/.julia/packages/OpenCV_jll/Hfsh1/src/OpenCV_jll.jl:2 in expression starting at stdin:4 ERROR: LoadError: Failed to precompile OpenCV_jll [33b9d88c-85f9-5d73-bd91-4e2b95a9aa0b] to "/home/stefanocovino/.julia/compiled/v1.11/OpenCV_jll/jl_54XHqw". Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}) @ Base ./loading.jl:3089 [3] (::Base.var"#1081#1082"{Base.PkgId})() @ Base ./loading.jl:2477 [4] mkpidlock(f::Base.var"#1081#1082"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.0+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 [5] #mkpidlock#6 @ ~/.julia/juliaup/julia-1.11.0+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile ~/.julia/juliaup/julia-1.11.0+0.x64.linux.gnu/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 [7] #invokelatest#2 @ ./essentials.jl:1056 [inlined] [8] invokelatest @ ./essentials.jl:1051 [inlined] [9] maybe_cachefile_lock(f::Base.var"#1081#1082"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3613 [10] maybe_cachefile_lock @ ./loading.jl:3610 [inlined] [11] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2473 [12] require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2300 [13] #invoke_in_world#3 @ ./essentials.jl:1088 [inlined] [14] invoke_in_world @ ./essentials.jl:1085 [inlined] [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2287 [16] macro expansion @ ./loading.jl:2226 [inlined] [17] macro expansion @ ./lock.jl:273 [inlined] [18] require(into::Module, mod::Symbol) @ Base ./loading.jl:2183 [19] #invoke_in_world#3 @ ./essentials.jl:1088 [inlined] [20] invoke_in_world @ ./essentials.jl:1085 [inlined] [21] require(into::Module, mod::Symbol) @ Base ./loading.jl:2176 [22] include @ ./Base.jl:557 [inlined] [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2806 [24] top-level scope @ stdin:4 in expression starting at /home/stefanocovino/.julia/packages/OpenCV/2FyNG/src/OpenCV.jl:1 in expression starting at stdin:
Hope it hekps in identyfing the problem.
Thanks.
Stefanoi