search

JuliaLang / Pkg.jl

Pkg - Package manager for the Julia programming language
https://pkgdocs.julialang.org
Other
622 stars 263 forks source link

Running `build` errors out Pkg3 #269

Closed KristofferC closed 6 years ago

KristofferC commented 6 years ago

Moved from Running build errors out Pkg3 #26896

(CoughSense3) pkg> build
ERROR: MethodError: no method matching haskey(::Nothing, ::String)                                             
Closest candidates are:
  haskey(::Base.Iterators.Pairs, ::Any) at iterators.jl:243                                                    
  haskey(::Dict, ::Any) at dict.jl:546
  haskey(::Base.ImmutableDict, ::Any) at dict.jl:729
  ...
Stacktrace:
 [1] _get_deps!(::Pkg3.Types.Context, ::Array{Pkg3.Types.PackageSpec,1}, ::Array{Base.UUID,1}) at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/API.jl:332
 [2] _get_deps!(::Pkg3.Types.Context, ::Array{Pkg3.Types.PackageSpec,1}, ::Array{Base.UUID,1}) at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/API.jl:336
 [3] #build#43(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::Pkg3.Types.Context, ::Array{Pkg3.Types.PackageSpec,1}) at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/API.jl:367
 [4] build at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/API.jl:347 [inlined]                      
 [5] do_build!(::Pkg3.Types.Context, ::Array{Union{Pkg3.Types.VersionRange, String, Pkg3.REPLMode.Command, Pkg3.REPLMode.Option, Pkg3.REPLMode.Rev},1}) at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/REPLMode.jl:714
 [6] (::getfield(Base, Symbol("#inner#4")){Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}},typeof(Pkg3.REPLMode.do_build!),Tuple{Pkg3.Types.Context,Array{Union{Pkg3.Types.VersionRange, String, Pkg3.REPLMode.Command, Pkg3.REPLMode.Option, Pkg3.REPLMode.Rev},1}}})() at ./essentials.jl:643                           
 [7] #invokelatest#3 at ./essentials.jl:644 [inlined]
 [8] invokelatest at ./essentials.jl:643 [inlined]
 [9] do_cmd!(::Array{Union{Pkg3.Types.VersionRange, String, Pkg3.REPLMode.Command, Pkg3.REPLMode.Option, Pkg3.REPLMode.Rev},1}, ::REPL.LineEditREPL) at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/REPLMode.jl:272 
 [10] #do_cmd#8(::Bool, ::Function, ::REPL.LineEditREPL, ::String) at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/REPLMode.jl:232
 [11] do_cmd at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/REPLMode.jl:229 [inlined]               
 [12] (::getfield(Pkg3.REPLMode, Symbol("##27#30")){REPL.LineEditREPL,REPL.LineEdit.Prompt})(::REPL.LineEdit.MIState, ::Base.GenericIOBuffer{Array{UInt8,1}}, ::Bool) at /src/julia-master/usr/share/julia/stdlib/v0.7/Pkg3/src/REPLMode.jl:916
 [13] top-level scope

The Project.toml file I'm using:

authors = ["coughsense "]
name = "CoughSense3"
uuid = "233159e8-4807-11e8-3b73-67712708687c"
version = "0.1.0"

[deps]
AuditoryFilters = "951eee0e-4809-11e8-26ea-b926cf965825"
DSP = "717857b8-e6f2-59f4-9121-6e50c889abd2"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
DecisionTree = "7806a523-6efd-50cb-b5f6-3fa6f1930dbb"
DocOpt = "968ba79b-81e4-546f-ab3a-2eecfa62a9db"
FLAC = "05003743-e4a8-526e-8961-a30f3f368c99"
Flux = "587475ba-b771-5e3f-ad9e-33799f191a9c"
HDF5 = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
Hiccup = "9fb69e20-1954-56bb-a84f-559cc56a8ff7"
IJulia = "7073ff75-c697-5162-941a-fcdaad2a7d2a"
Iterators = "a4bce56a-f44e-563f-a45f-5312daf41243"
JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
MFCC = "ca7b5df7-6146-5dcc-89ec-36256279a339"
NearestNeighbors = "b8a86587-4115-5ab1-83bc-aa920d37bbce"
PlotlyJS = "f0f68f2c-4968-5e81-91da-67840de0976a"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
Polynomials = "f27b6e38-b328-58d1-80ce-0feddd5e7a45"
PyPlot = "d330b81b-6aea-500a-939a-2ce795aea3ee"
StatPlots = "60ddc479-9b66-56df-82fc-76a74619b69c"
StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
UnicodePlots = "b8865327-cd53-5732-bb35-84acbb429228"

This is running on:

julia> versioninfo()
Julia Version 0.7.0-DEV.4941
Commit 9f5351c36a (2018-04-24 14:26 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
  CPU: Intel(R) Xeon(R) CPU E3-1230 v6 @ 3.50GHz
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-3.9.1 (ORCJIT, skylake)
Environment:
KristofferC commented 6 years ago

The error message here is bad. Will work to improve it. But what I think is happening is that the Manifest file is not up to date.

What happens if you do Pkg3.up(; level = Pkg3.Types.UPLEVEL_FIXED) first?

cc @staticfloat

staticfloat commented 6 years ago

Turns out this is because Manifest.toml was moved; so kind of a pathological bad case, but perhaps we should identify that and state it to the developer explicitly. Sorry for the noise. :)

KristofferC commented 6 years ago

No, we definitely need to print something better here :)

diegozea commented 5 years ago

Hi, I'm getting this error. Is there a way to solve it?

fredrikekre commented 5 years ago

Can you provide more information? Error output? Project + Manifest? Link to CI logs?

diegozea commented 5 years ago

Sorry for the delay. I'm also getting this error when I'm running update.

Probably related: https://github.com/JuliaLang/Pkg.jl/issues/822 https://github.com/JuliaLang/Pkg.jl/issues/918

julia> using InteractiveUtils

(v1.0) pkg> up
  Updating registry at `~/.julia/registries/General`
  Updating git-repo `https://github.com/JuliaRegistries/General.git`
  Updating git-repo `https://github.com/carlobaldassi/GaussDCA.jl`
  Updating git-repo `https://github.com/diegozea/PairwiseListMatrices.jl.git`
  Updating git-repo `https://github.com/jgreener64/Bio3DView.jl`
 Resolving package versions...
  Updating `~/.julia/environments/v1.0/Project.toml`
 [no changes]
  Updating `~/.julia/environments/v1.0/Manifest.toml`
 [no changes]
ERROR: MethodError: no method matching getindex(::Nothing, ::String)
Stacktrace:
 [1] #build_versions#47(::Bool, ::Function, ::Pkg.Types.Context, ::Array{Base.UUID,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/Operations.jl:1045
 [2] build_versions at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/Operations.jl:1034 [inlined]
 [3] up(::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/Operations.jl:1247
 [4] #up#29(::Pkg.Types.UpgradeLevel, ::Pkg.Types.PackageMode, ::Bool, ::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::Pkg.Types.Context, ::Array{Pkg.Types.PackageSpec,1}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/API.jl:198
 [5] up at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/API.jl:171 [inlined]
 [6] do_up!(::Dict{Symbol,Any}, ::Array{Pkg.Types.PackageSpec,1}, ::Dict{Symbol,Any}) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/REPLMode.jl:686
 [7] #invokelatest#1(::Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}}, ::Function, ::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:697
 [8] invokelatest(::Any, ::Any, ::Vararg{Any,N} where N) at ./essentials.jl:696
 [9] do_cmd!(::Pkg.REPLMode.PkgCommand, ::REPL.LineEditREPL) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/REPLMode.jl:603
 [10] #do_cmd#33(::Bool, ::Function, ::REPL.LineEditREPL, ::String) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/REPLMode.jl:577
 [11] do_cmd at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/REPLMode.jl:573 [inlined]
 [12] (::getfield(Pkg.REPLMode, Symbol("##50#53")){REPL.LineEditREPL,REPL.LineEdit.Prompt})(::REPL.LineEdit.MIState, ::Base.GenericIOBuffer{Array{UInt8,1}}, ::Bool) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Pkg/src/REPLMode.jl:923
 [13] #invokelatest#1 at ./essentials.jl:697 [inlined]
 [14] invokelatest at ./essentials.jl:696 [inlined]
 [15] run_interface(::REPL.Terminals.TextTerminal, ::REPL.LineEdit.ModalInterface, ::REPL.LineEdit.MIState) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/REPL/src/LineEdit.jl:2268
 [16] run_frontend(::REPL.LineEditREPL, ::REPL.REPLBackendRef) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/REPL/src/REPL.jl:1034
 [17] run_repl(::REPL.AbstractREPL, ::Any) at /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/REPL/src/REPL.jl:191
 [18] (::getfield(Base, Symbol("##719#721")){Bool,Bool,Bool,Bool})(::Module) at ./logging.jl:309
 [19] #invokelatest#1 at ./essentials.jl:697 [inlined]
 [20] invokelatest at ./essentials.jl:696 [inlined]
 [21] macro expansion at ./logging.jl:306 [inlined]
 [22] run_main_repl(::Bool, ::Bool, ::Bool, ::Bool, ::Bool) at ./client.jl:334
 [23] exec_options(::Base.JLOptions) at ./client.jl:246
 [24] _start() at ./client.jl:425

(v1.0) pkg> st
    Status `~/.julia/environments/v1.0/Project.toml`
  [c7e460c6] ArgParse v0.6.1
  [c52e3926] Atom v0.7.14
  [6e4b80f9] BenchmarkTools v0.4.2
  [e334fcbd] Bio3DView v0.0.0 #master (https://github.com/jgreener64/Bio3DView.jl)
  [00701ae9] BioAlignments v1.0.0
  [7e6ae17a] BioSequences v1.1.0
  [3c28c6f8] BioSymbols v3.1.0
  [336ed68f] CSV v0.4.3
  [a93c6f00] DataFrames v0.17.0
  [864edb3b] DataStructures v0.15.0
  [ab62b9b5] DeepDiffs v1.1.0
  [e30172f5] Documenter v0.21.0
  [5789e2e9] FileIO v1.0.5
  [1fa38f19] Format v0.7.2 [`~/.julia/dev/Format`]
  [59287772] Formatting v0.3.5
  [28b8d3ca] GR v0.37.0
  [92cae0f8] GaussDCA v0.0.0 #master (https://github.com/carlobaldassi/GaussDCA.jl)
  [c27321d9] Glob v1.2.0
  [bd48cda9] GraphRecipes v0.4.0
  [a2bd30eb] Graphics v0.4.0
  [4c0ca9eb] Gtk v0.16.4
  [7073ff75] IJulia v1.15.2
  [18364772] IPython v0.4.0
  [6218d12a] ImageMagick v0.7.1
  [86fae568] ImageView v0.8.2
  [916415d5] Images v0.17.0
  [d0351b0e] InspectDR v0.3.3
  [c601a237] Interact v0.9.0
  [e5e0dc1b] Juno v0.5.4
  [b964fa9f] LaTeXStrings v1.0.3
  [51bafb47] MIToS v2.3.3+ [`~/.julia/dev/MIToS`]
  [86f7a689] NamedArrays v0.9.2
  [47be7bcc] ORCA v0.2.0
  [3b7a836e] PGFPlots v3.0.3
  [f9da4da7] PairwiseListMatrices v0.7.0+ #master (https://github.com/diegozea/PairwiseListMatrices.jl.git)
  [0e44f1d2] PlotRecipes v0.3.0+ [`~/.julia/dev/PlotRecipes`]
  [f0f68f2c] PlotlyJS v0.12.3
  [91a5bcdd] Plots v0.22.5
  [c46f51b8] ProfileView v0.4.0
  [438e738f] PyCall v1.18.5
  [d330b81b] PyPlot v2.7.0
  [f535d66d] ROCAnalysis v0.3.0
  [3cdcf5f2] RecipesBase v0.6.0
  [60ddc479] StatPlots v0.9.2
  [65254759] StatsMakie v0.0.2
  [88034a9c] StringDistances v0.3.1
  [37b6cedf] Traceur v0.2.1
  [b8865327] UnicodePlots v1.0.1

julia> versioninfo(verbose=true)
Julia Version 1.0.2
Commit d789231e99 (2018-11-08 20:11 UTC)
Platform Info:
  OS: Linux (x86_64-pc-linux-gnu)
      Ubuntu 16.04.5 LTS
  uname: Linux 4.15.0-43-generic #46~16.04.1-Ubuntu SMP Fri Dec 7 13:31:08 UTC 2018 x86_64 x86_64
  CPU: Intel(R) Xeon(R) CPU E5-2609 v3 @ 1.90GHz: 
              speed         user         nice          sys         idle          irq
       #1  1393 MHz     960989 s      52554 s     367906 s   33159264 s          0 s
       #2  1865 MHz     941883 s      49427 s     359767 s   33183573 s          0 s
       #3  1357 MHz     887690 s      47716 s     360206 s   33249995 s          0 s
       #4  1616 MHz     875855 s      54910 s     375829 s   33217454 s          0 s
       #5  1434 MHz     881350 s      50626 s     376817 s   33208004 s          0 s
       #6  1197 MHz     887878 s      48735 s     356296 s   33228806 s          0 s

  Memory: 31.339038848876953 GB (3768.6328125 MB free)
  Uptime: 350041.0 sec
  Load Avg:  0.5546875  0.7548828125  0.76318359375
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-6.0.0 (ORCJIT, haswell)
Environment:
  TERM = xterm-256color
  XDG_SESSION_PATH = /org/freedesktop/DisplayManager/Session0
  XDG_SEAT_PATH = /org/freedesktop/DisplayManager/Seat0
  DEFAULTS_PATH = /usr/share/gconf/ubuntu.default.path
  PATH = /home/zea/bin:/home/zea/.local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/home/zea/bin:/home/zea/.linuxbrew/bin
  MANDATORY_PATH = /usr/share/gconf/ubuntu.mandatory.path
  HOME = /home/zea
  COMPIZ_BIN_PATH = /usr/bin/
~/.julia/environments/v1.0$ cat Manifest.toml 
[[ASTInterpreter2]]
deps = ["DebuggerFramework"]
git-tree-sha1 = "8df3d36e0286777d226f4fd4956a432b73425186"
uuid = "e6d88f4b-b52a-544c-a8d3-7a4f12cb39c3"
version = "0.1.1"

[[AbstractFFTs]]
deps = ["Compat", "LinearAlgebra"]
git-tree-sha1 = "8d59c3b1463b5e0ad05a3698167f85fac90e184d"
uuid = "621f4979-c628-5d54-868e-fcf4e3e8185c"
version = "0.3.2"

[[AbstractPlotting]]
deps = ["ColorBrewer", "ColorTypes", "Colors", "Contour", "FileIO", "FixedPointNumbers", "FreeType", "FreeTypeAbstraction", "GeometryTypes", "ImageMagick", "IntervalSets", "LinearAlgebra", "Markdown", "Observables", "Packing", "PlotUtils", "Printf", "Random", "Serialization", "Showoff", "SignedDistanceFields", "StaticArrays", "Statistics", "Test", "UnicodeFun"]
git-tree-sha1 = "ee1e2ebc568bbd57e0aa49b16f5593068043e998"
uuid = "537997a7-5e4e-5d89-9595-2241ea00577e"
version = "0.9.3"

[[ArgParse]]
deps = ["Compat", "Test", "TextWrap"]
git-tree-sha1 = "37159c768f28ae52ef9af1e70669d25a68ba7d61"
uuid = "c7e460c6-2fb9-53a9-8c5b-16f535851c63"
version = "0.6.1"

[[ArnoldiMethod]]
deps = ["DelimitedFiles", "LinearAlgebra", "Random", "SparseArrays", "StaticArrays", "Test"]
git-tree-sha1 = "2b6845cea546604fb4dca4e31414a6a59d39ddcd"
uuid = "ec485272-7323-5ecc-a04f-4719b315124d"
version = "0.0.4"

[[Arpack]]
deps = ["BinaryProvider", "Libdl", "LinearAlgebra", "Random", "SparseArrays", "Test"]
git-tree-sha1 = "1ce1ce9984683f0b6a587d5bdbc688ecb480096f"
uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97"
version = "0.3.0"

[[AssetRegistry]]
deps = ["Distributed", "JSON", "Pidfile", "SHA", "Test"]
git-tree-sha1 = "b25e88db7944f98789130d7b503276bc34bc098e"
uuid = "bf4720bc-e11a-5d0c-854e-bdca1663c893"
version = "0.1.0"

[[Atom]]
deps = ["ASTInterpreter2", "Base64", "CodeTools", "DebuggerFramework", "DocSeeker", "HTTP", "Hiccup", "JSON", "Juno", "LNR", "Lazy", "Logging", "MacroTools", "Markdown", "Media", "Pkg", "Profile", "REPL", "Reexport", "Requires", "Sockets", "Test", "Traceur", "TreeViews", "WebIO", "WebSockets"]
git-tree-sha1 = "883f36e7077b82b4f36a9c370c7c4b55c0239ab3"
uuid = "c52e3926-4ff0-5f6e-af25-54175e0327b1"
version = "0.7.14"

[[AutoHashEquals]]
git-tree-sha1 = "45bb6705d93be619b81451bb2006b7ee5d4e4453"
uuid = "15f4f7f2-30c1-5605-9d31-71845cf9641f"
version = "0.2.0"

[[Automa]]
deps = ["DataStructures", "Printf", "Test", "TranscodingStreams"]
git-tree-sha1 = "1b1defa8b36d44dd22c715b5c884c8f795eea7fe"
uuid = "67c07d97-cdcb-5c2c-af73-a7f9c32a568b"
version = "0.7.0"

[[AxisAlgorithms]]
deps = ["Compat", "WoodburyMatrices"]
git-tree-sha1 = "99dabbe853e4f641ab21a676131f2cf9fb29937e"
uuid = "13072b0f-2c55-5437-9ae7-d433b7a33950"
version = "0.3.0"

[[AxisArrays]]
deps = ["Compat", "Dates", "IntervalSets", "IterTools", "Random", "RangeArrays", "Test"]
git-tree-sha1 = "2e2536e9e6f27c4f8d09d8442b61a7ae0b910c28"
uuid = "39de3d68-74b9-583c-8d2d-e117c070f3a9"
version = "0.3.0"

[[BGZFStreams]]
deps = ["CodecZlib", "Test"]
git-tree-sha1 = "b0e322aef9f1895a09a0c48a118111fd509f666a"
uuid = "28d598bf-9b8f-59f1-b38c-5a06b4a0f5e6"
version = "0.3.0"

[[Base64]]
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

[[BenchmarkTools]]
deps = ["JSON", "Printf", "Statistics", "Test"]
git-tree-sha1 = "5d1dd8577643ba9014574cd40d9c028cd5e4b85a"
uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf"
version = "0.4.2"

[[BinDeps]]
deps = ["Compat", "Libdl", "SHA", "URIParser"]
git-tree-sha1 = "12093ca6cdd0ee547c39b1870e0c9c3f154d9ca9"
uuid = "9e28174c-4ba2-5203-b857-d8d62c4213ee"
version = "0.8.10"

[[BinaryProvider]]
deps = ["Libdl", "Pkg", "SHA", "Test"]
git-tree-sha1 = "055eb2690182ebc31087859c3dd8598371d3ef9e"
uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232"
version = "0.5.3"

[[Bio3DView]]
deps = ["Requires", "Test"]
git-tree-sha1 = "b5afbd2c2792eb3c5d86b8756f35f0304e0a08f2"
repo-rev = "master"
repo-url = "https://github.com/jgreener64/Bio3DView.jl"
uuid = "e334fcbd-ee6d-558c-86ec-56a3c546e5fa"
version = "0.0.0"

[[BioAlignments]]
deps = ["Automa", "BGZFStreams", "BioCore", "BioSequences", "BioSymbols", "BufferedStreams", "GenomicFeatures", "IntervalTrees", "LinearAlgebra", "Printf", "Test"]
git-tree-sha1 = "b6f2fc06b7c20d7c0538ddb99bd593cd8b4bd6dc"
uuid = "00701ae9-d1dc-5365-b64a-a3a3ebf5695e"
version = "1.0.0"

[[BioCore]]
deps = ["Automa", "BufferedStreams", "YAML"]
git-tree-sha1 = "476edbf4ef94594fff430a84ca96f86cb2327a71"
uuid = "37cfa864-2cd6-5c12-ad9e-b6597d696c81"
version = "2.0.5"

[[BioSequences]]
deps = ["Automa", "BioCore", "BioSymbols", "BufferedStreams", "Combinatorics", "IndexableBitVectors", "IntervalTrees", "LinearAlgebra", "Printf", "Random", "Test", "Twiddle"]
git-tree-sha1 = "29341326bfab7ebef261dab128874b9e3fece5c2"
uuid = "7e6ae17a-c86d-528c-b3b9-7f778a29fe59"
version = "1.1.0"

[[BioSymbols]]
deps = ["Automa", "Test"]
git-tree-sha1 = "36bd8fc32e02b60dba123d5eecc7b4a90ef7d265"
uuid = "3c28c6f8-a34d-59c4-9654-267d177fcfa9"
version = "3.1.0"

[[Blink]]
deps = ["Base64", "BinDeps", "Distributed", "JSExpr", "JSON", "Lazy", "Libdl", "Logging", "MacroTools", "Mustache", "Mux", "Reexport", "Sockets", "Test", "WebIO", "WebSockets"]
git-tree-sha1 = "cd169880989669c2d48a72be9a2a691def62e257"
uuid = "ad839575-38b3-5650-b840-f874b8c74a25"
version = "0.9.0"

[[BufferedStreams]]
deps = ["Compat", "Test"]
git-tree-sha1 = "5d55b9486590fdda5905c275bb21ce1f0754020f"
uuid = "e1450e63-4bb3-523b-b2a4-4ffa8c0fd77d"
version = "1.0.0"

[[CSSUtil]]
deps = ["Colors", "Compat", "JSON", "Measures", "Pkg", "WebIO"]
git-tree-sha1 = "ff13fd99e4dd54f56eb064815f843bc992a871a2"
uuid = "70588ee8-6100-5070-97c1-3cb50ed05fe8"
version = "0.1.0"

[[CSV]]
deps = ["CategoricalArrays", "DataFrames", "DataStreams", "Dates", "Mmap", "Parsers", "Profile", "Random", "Tables", "Test", "Unicode", "WeakRefStrings"]
git-tree-sha1 = "b92c6f626a044cc9619156d54994b94084d40abe"
uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
version = "0.4.3"

[[Cairo]]
deps = ["BinDeps", "Colors", "Compat", "Graphics", "Homebrew", "Libdl", "WinRPM"]
git-tree-sha1 = "a427098d5aa2808504d94b8ed9fc5740ceaf71d0"
uuid = "159f3aea-2a34-519c-b102-8c37f9878175"
version = "0.5.6"

[[Calculus]]
deps = ["Compat"]
git-tree-sha1 = "f60954495a7afcee4136f78d1d60350abd37a409"
uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9"
version = "0.4.1"

[[Cassette]]
deps = ["InteractiveUtils", "LinearAlgebra", "Test"]
git-tree-sha1 = "6eab7f863acb75eecec5f9df3d5bb0551a63fddc"
uuid = "7057c7e9-c182-5462-911a-8362d720325c"
version = "0.2.1"

[[CatIndices]]
deps = ["CustomUnitRanges", "OffsetArrays", "Test"]
git-tree-sha1 = "254cf73ea369d2e39bfd6c5eb27a2296cfaed68c"
uuid = "aafaddc9-749c-510e-ac4f-586e18779b91"
version = "0.2.0"

[[CategoricalArrays]]
deps = ["Compat", "Future", "Missings", "Printf", "Reexport", "Requires"]
git-tree-sha1 = "94d16e77dfacc59f6d6c1361866906dbb65b6f6b"
uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597"
version = "0.5.2"

[[Clustering]]
deps = ["Dates", "Distances", "LinearAlgebra", "NearestNeighbors", "Printf", "Random", "SparseArrays", "Statistics", "StatsBase", "Test"]
git-tree-sha1 = "282e5d488cfca89b78b28b9ef28a59898951a62f"
uuid = "aaaa29a8-35af-508c-8bc3-b662a17a0fe5"
version = "0.12.1"

[[CodeTools]]
deps = ["LNR", "Lazy", "Markdown", "Pkg", "Test", "Tokenize"]
git-tree-sha1 = "b50b63d30896e1e969e9e7767d44c4d34878b416"
uuid = "53a63b46-67e4-5edd-8c66-0af0544a99b9"
version = "0.6.4"

[[CodecZlib]]
deps = ["BinaryProvider", "Libdl", "Test", "TranscodingStreams"]
git-tree-sha1 = "e3df104c84dfc108f0ca203fd7f5bbdc98641ae9"
uuid = "944b1d66-785c-5afd-91f1-9de20f533193"
version = "0.5.1"

[[Codecs]]
deps = ["Test"]
git-tree-sha1 = "70885e5e038cba1c4c17a84ad6c40756e10a4fb5"
uuid = "19ecbf4d-ef7c-5e4b-b54a-0a0ff23c5aed"
version = "0.5.0"

[[ColorBrewer]]
deps = ["Colors", "JSON", "Test"]
git-tree-sha1 = "61c5334f33d91e570e1d0c3eb5465835242582c4"
uuid = "a2cac450-b92f-5266-8821-25eda20663c8"
version = "0.4.0"

[[ColorTypes]]
deps = ["FixedPointNumbers", "Random", "Test"]
git-tree-sha1 = "f73b0e10f2a5756de7019818a41654686da06b09"
uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
version = "0.7.5"

[[ColorVectorSpace]]
deps = ["ColorTypes", "Colors", "FixedPointNumbers", "LinearAlgebra", "SpecialFunctions", "Statistics", "StatsBase", "Test"]
git-tree-sha1 = "a890f08e61b40e9843d7177206da61229a3603c8"
uuid = "c3611d14-8923-5661-9e6a-0046d554d3a4"
version = "0.6.2"

[[Colors]]
deps = ["ColorTypes", "FixedPointNumbers", "InteractiveUtils", "Printf", "Reexport", "Test"]
git-tree-sha1 = "9f0a0210450acb91c730b730a994f8eef1d3d543"
uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
version = "0.9.5"

[[Combinatorics]]
deps = ["LinearAlgebra", "Polynomials", "Test"]
git-tree-sha1 = "50b3ae4d643dc27eaff69fb6be06ee094d5500c9"
uuid = "861a8166-3701-5b0c-9a16-15d98fcdc6aa"
version = "0.7.0"

[[CommonSubexpressions]]
deps = ["Test"]
git-tree-sha1 = "efdaf19ab11c7889334ca247ff4c9f7c322817b0"
uuid = "bbf7d656-a473-5ed7-a52c-81e309532950"
version = "0.2.0"

[[Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
git-tree-sha1 = "ec61a16eed883ad0cfa002d7489b3ce6d039bb9a"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "1.4.0"

[[ComputationalResources]]
deps = ["Test"]
git-tree-sha1 = "89e7e7ed20af73d9f78877d2b8d1194e7b6ff13d"
uuid = "ed09eef8-17a6-5b46-8889-db040fac31e3"
version = "0.3.0"

[[Conda]]
deps = ["Compat", "JSON", "VersionParsing"]
git-tree-sha1 = "fb86fe40cb5b35990e368709bfdc1b46dbb99dac"
uuid = "8f4d0f93-b110-5947-807f-2305c1781a2d"
version = "1.1.1"

[[Contour]]
deps = ["LinearAlgebra", "StaticArrays", "Test"]
git-tree-sha1 = "b974e164358fea753ef853ce7bad97afec15bb80"
uuid = "d38c429a-6771-53c6-b99e-75d170b6e991"
version = "0.5.1"

[[CoordinateTransformations]]
deps = ["Compat", "Rotations", "StaticArrays"]
git-tree-sha1 = "47f05d0b7f4999609f92e657147df000818c1f24"
uuid = "150eb455-5306-5404-9cee-2592286d6298"
version = "0.5.0"

[[CustomUnitRanges]]
deps = ["Test"]
git-tree-sha1 = "0a106457a1831555857e18ac9617279c22fc393b"
uuid = "dc8bdbbb-1ca9-579f-8c36-e416f6a65cce"
version = "0.2.0"

[[DataFrames]]
deps = ["CategoricalArrays", "CodecZlib", "Compat", "DataStreams", "Dates", "InteractiveUtils", "IteratorInterfaceExtensions", "LinearAlgebra", "Missings", "Printf", "Random", "Reexport", "SortingAlgorithms", "Statistics", "StatsBase", "TableTraits", "Tables", "Test", "TranscodingStreams", "Unicode", "WeakRefStrings"]
git-tree-sha1 = "af5c8a233b838076947ef0c8f882f732ad578112"
uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
version = "0.17.0"

[[DataStreams]]
deps = ["Dates", "Missings", "Test", "WeakRefStrings"]
git-tree-sha1 = "69c72a1beb4fc79490c361635664e13c8e4a9548"
uuid = "9a8bc11e-79be-5b39-94d7-1ccc349a1a85"
version = "0.4.1"

[[DataStructures]]
deps = ["InteractiveUtils", "OrderedCollections", "Random", "Serialization", "Test"]
git-tree-sha1 = "ca971f03e146cf144a9e2f2ce59674f5bf0e8038"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.15.0"

[[DataValues]]
deps = ["Dates", "InteractiveUtils", "LinearAlgebra", "Random", "Test"]
git-tree-sha1 = "f0f4c2d6a46068044fc6f7ce487e95fc73880700"
uuid = "e7dc6d0d-1eca-5fa6-8ad6-5aecde8b7ea5"
version = "0.4.6"

[[Dates]]
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[DebuggerFramework]]
git-tree-sha1 = "0288f278a5f58c28c67ad1cf55dce950069709b7"
uuid = "67417a49-6d77-5db2-98c7-c13144130cd2"
version = "0.1.2"

[[DeepDiffs]]
deps = ["Compat"]
git-tree-sha1 = "cd4648e98d5625c75b9ebbec516533ec1250ce57"
uuid = "ab62b9b5-e342-54a8-a765-a90f495de1a6"
version = "1.1.0"

[[DelimitedFiles]]
deps = ["Mmap"]
uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"

[[DiffEqDiffTools]]
deps = ["LinearAlgebra", "Test"]
git-tree-sha1 = "67700c9fc82033ec68a145bc650f6b9debdf9103"
uuid = "01453d9d-ee7c-5054-8395-0335cb756afa"
version = "0.7.1"

[[DiffResults]]
deps = ["Compat", "StaticArrays"]
git-tree-sha1 = "db8acf46717b13d6c48deb7a12007c7f85a70cf7"
uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5"
version = "0.0.3"

[[DiffRules]]
deps = ["Random", "Test"]
git-tree-sha1 = "c49ec69428ffea0c1d1bbdc63d1a70f5df5860ad"
uuid = "b552c78f-8df3-52c6-915a-8e097449b14b"
version = "0.0.7"

[[Discretizers]]
deps = ["DataStructures", "SpecialFunctions", "Statistics", "StatsBase", "Test"]
git-tree-sha1 = "05062165b5c53e5d91a25267d11df6a112d1627e"
uuid = "6e83dbb3-75ca-525b-8ae2-3751f0dd50b4"
version = "3.0.1"

[[Distances]]
deps = ["LinearAlgebra", "Printf", "Random", "Statistics", "Test"]
git-tree-sha1 = "0e37d8a95bafbeb9c800ef27ab6f443d29e17610"
uuid = "b4f34e82-e78d-54a5-968a-f98e89d6e8f7"
version = "0.7.4"

[[Distributed]]
deps = ["LinearAlgebra", "Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[Distributions]]
deps = ["Distributed", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"]
git-tree-sha1 = "c24e9b6500c037673f0241a2783472b8c3d080c7"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.16.4"

[[DocSeeker]]
deps = ["Hiccup", "IterTools", "Markdown", "REPL", "Requires", "Serialization", "StringDistances", "Test", "URIParser"]
git-tree-sha1 = "8d4d5f9ec970944445c77cfdcd5d3246a4e0cd0d"
uuid = "33d173f1-3be9-53c5-a697-8225b67db89c"
version = "0.2.0"

[[DocStringExtensions]]
deps = ["LibGit2", "Markdown", "Pkg", "Test"]
git-tree-sha1 = "1df01539a1c952cef21f2d2d1c092c2bcf0177d7"
uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
version = "0.6.0"

[[Documenter]]
deps = ["Base64", "DocStringExtensions", "InteractiveUtils", "LibGit2", "Logging", "Markdown", "Pkg", "REPL", "Random", "Test", "Unicode"]
git-tree-sha1 = "a6db1c69925cdc53aafb38caec4446be26e0c617"
uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
version = "0.21.0"

[[FFTViews]]
deps = ["CustomUnitRanges", "FFTW", "Test"]
git-tree-sha1 = "9d7993227ca7c0fdb6b31deef193adbba11c8f4e"
uuid = "4f61f5a4-77b1-5117-aa51-3ab5ef4ef0cd"
version = "0.2.0"

[[FFTW]]
deps = ["AbstractFFTs", "BinaryProvider", "Compat", "Conda", "Libdl", "LinearAlgebra", "Reexport", "Test"]
git-tree-sha1 = "29cda58afbf62f35b1a094882ad6c745a47b2eaa"
uuid = "7a1cc6ca-52ef-59f5-83cd-3a7055c09341"
version = "0.2.4"

[[FastaIO]]
deps = ["GZip", "Test"]
git-tree-sha1 = "af091e7129d38d85d611c209f2d83f5b4b450e20"
uuid = "a0c94c4b-ebed-5953-b5fc-82fe598ac79f"
version = "0.5.0"

[[FileIO]]
deps = ["Pkg", "Random", "Test"]
git-tree-sha1 = "c94b0787956629036fb2b20fccde9e52b89d079a"
uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
version = "1.0.5"

[[FileWatching]]
uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"

[[FixedPointNumbers]]
deps = ["Test"]
git-tree-sha1 = "b8045033701c3b10bf2324d7203404be7aef88ba"
uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
version = "0.5.3"

[[Format]]
deps = ["Compat"]
path = "/home/zea/.julia/dev/Format"
uuid = "1fa38f19-a742-5d3f-a2b9-30dd87b9d5f8"
version = "0.7.2"

[[Formatting]]
deps = ["Compat"]
git-tree-sha1 = "289003271ce9c8194c1ce56a3c433f1c51841125"
uuid = "59287772-0a20-5a39-b81b-1366585eb4c0"
version = "0.3.5"

[[ForwardDiff]]
deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "InteractiveUtils", "LinearAlgebra", "NaNMath", "Random", "SparseArrays", "SpecialFunctions", "StaticArrays", "Test"]
git-tree-sha1 = "e393bd3b9102659fb24fe88caedec41f2bc2e7de"
uuid = "f6369f11-7733-5829-9624-2563aa707210"
version = "0.10.2"

[[FreeType]]
deps = ["BinaryProvider", "Libdl", "Pkg", "Test"]
git-tree-sha1 = "06462b9d5aca708d764d16e5ba6a83ba7b753d57"
uuid = "b38be410-82b0-50bf-ab77-7b57e271db43"
version = "2.1.1"

[[FreeTypeAbstraction]]
deps = ["ColorVectorSpace", "Colors", "FreeType", "StaticArrays", "Test"]
git-tree-sha1 = "271ef13438bd0946950fd34d9241e5beefd6d4b3"
uuid = "663a7486-cb36-511b-a19d-713bb74d65c9"
version = "0.4.1"

[[FreqTables]]
deps = ["CategoricalArrays", "NamedArrays", "Tables", "Test"]
git-tree-sha1 = "93ce75cae27c2d1c6518771d597b6dd0a3d623d3"
uuid = "da1fdf0e-e0ff-5433-a45f-9bb5ff651cb1"
version = "0.3.1"

[[FunctionalCollections]]
deps = ["Test"]
git-tree-sha1 = "04cb9cfaa6ba5311973994fe3496ddec19b6292a"
uuid = "de31a74c-ac4f-5751-b3fd-e18cd04993ca"
version = "0.5.0"

[[Future]]
deps = ["Random"]
uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820"

[[GR]]
deps = ["Base64", "DelimitedFiles", "LinearAlgebra", "Pkg", "Printf", "Random", "Serialization", "Sockets", "Test"]
git-tree-sha1 = "3c62c19ddf86ff016829fdac1663cd3c75558c34"
uuid = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71"
version = "0.37.0"

[[GZip]]
deps = ["Libdl", "Test"]
git-tree-sha1 = "ee443ef166b29282301468d8af403e1ed8f5412e"
uuid = "92fee26a-97fe-5a0c-ad85-20a5f3185b63"
version = "0.5.0"

[[GaussDCA]]
deps = ["Compat", "FastaIO"]
git-tree-sha1 = "fbfa2df1a507f413e7bb32f8b44c1f96f044cabf"
repo-rev = "master"
repo-url = "https://github.com/carlobaldassi/GaussDCA.jl"
uuid = "92cae0f8-736c-5811-a1a9-a89e38a991ed"
version = "0.0.0"

[[GenomicFeatures]]
deps = ["Automa", "BGZFStreams", "BioCore", "BioSequences", "BufferedStreams", "ColorTypes", "DataStructures", "FixedPointNumbers", "IntervalTrees", "Libz", "Random", "Test", "URIParser"]
git-tree-sha1 = "3d6dd4ec649a45a7a7d0096d388e2701af9946f4"
uuid = "899a7d2d-5c61-547b-bef9-6698a8d05446"
version = "1.0.0"

[[GeometryTypes]]
deps = ["ColorTypes", "FixedPointNumbers", "IterTools", "LinearAlgebra", "StaticArrays", "Test"]
git-tree-sha1 = "28b193e14466beecf928449e0f8505ff6de3709d"
uuid = "4d00f742-c7ba-57c2-abde-4428a4b178cb"
version = "0.7.2"

[[Glob]]
deps = ["Compat", "Test"]
git-tree-sha1 = "c72f1fcb7d17426de1e8af2e948dfb3de1116eed"
uuid = "c27321d9-0574-5035-807b-f59d2c89b15c"
version = "1.2.0"

[[GraphRecipes]]
deps = ["InteractiveUtils", "LightGraphs", "LinearAlgebra", "NetworkLayout", "PlotUtils", "RecipesBase", "SparseArrays", "Statistics", "Test"]
git-tree-sha1 = "4023da628d5adee114e7c6531c4d5ce87a19a654"
uuid = "bd48cda9-67a9-57be-86fa-5b3c104eda73"
version = "0.4.0"

[[Graphics]]
deps = ["Colors", "Compat", "NaNMath"]
git-tree-sha1 = "e3ead4211073d4117a0d2ef7d1efc5c8092c8412"
uuid = "a2bd30eb-e257-5431-a919-1863eab51364"
version = "0.4.0"

[[Gtk]]
deps = ["BinDeps", "Cairo", "Compat", "Graphics", "Homebrew", "Libdl", "Reexport", "Serialization", "Test", "WinRPM"]
git-tree-sha1 = "261bfcf4910db53990f289c1338aa8eb3b89fb44"
uuid = "4c0ca9eb-093a-5379-98c5-f87ac0bbbf44"
version = "0.16.4"

[[GtkReactive]]
deps = ["Cairo", "Colors", "Dates", "FixedPointNumbers", "Graphics", "Gtk", "IntervalSets", "Reactive", "Reexport", "RoundingIntegers", "Test"]
git-tree-sha1 = "6d5596de3fd5d6d2f012f6f36d3b226eac5e2b47"
uuid = "27996c0f-39cd-5cc1-a27a-05f136f946b6"
version = "0.5.3"

[[HTTP]]
deps = ["Base64", "Dates", "Distributed", "IniFile", "MbedTLS", "Sockets", "Test"]
git-tree-sha1 = "b881f69331e85642be315c63d05ed65d6fc8a05b"
uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3"
version = "0.7.1"

[[HTTPClient]]
deps = ["Compat", "LibCURL"]
git-tree-sha1 = "161d5776ae8e585ac0b8c20fb81f17ab755b3671"
uuid = "0862f596-cf2d-50af-8ef4-f2be67dfa83f"
version = "0.2.1"

[[Hiccup]]
deps = ["MacroTools", "Test"]
git-tree-sha1 = "6187bb2d5fcbb2007c39e7ac53308b0d371124bd"
uuid = "9fb69e20-1954-56bb-a84f-559cc56a8ff7"
version = "0.2.2"

[[Homebrew]]
deps = ["BinDeps", "InteractiveUtils", "JSON", "Libdl", "Test", "Unicode"]
git-tree-sha1 = "f01fb2f34675f9839d55ba7238bab63ebd2e531e"
uuid = "d9be37ee-ecc9-5288-90f1-b9ca67657a75"
version = "0.7.1"

[[IJulia]]
deps = ["Base64", "Conda", "Dates", "InteractiveUtils", "JSON", "Markdown", "MbedTLS", "Pkg", "Printf", "REPL", "Random", "SoftGlobalScope", "Test", "UUIDs", "ZMQ"]
git-tree-sha1 = "5b121bf5df700f0766497415b23c6aa4a2620460"
uuid = "7073ff75-c697-5162-941a-fcdaad2a7d2a"
version = "1.15.2"

[[IPython]]
deps = ["Compat", "Conda", "InteractiveUtils", "Pkg", "PyCall", "REPL", "Test"]
git-tree-sha1 = "fa47a01375ff1e2ca00b438f1fcbbba41857970b"
uuid = "18364772-b071-5c00-bfd7-ceeaffab630a"
version = "0.4.0"

[[IdentityRanges]]
deps = ["OffsetArrays", "Test"]
git-tree-sha1 = "f5ca23a08397288924a7535cd898d8ccbcde5ba5"
uuid = "bbac6d45-d8f3-5730-bfe4-7a449cd117ca"
version = "0.2.0"

[[ImageAxes]]
deps = ["AxisArrays", "Colors", "FixedPointNumbers", "ImageCore", "MappedArrays", "Reexport", "SimpleTraits", "Test"]
git-tree-sha1 = "5735ec90843acaa67a4624611921c686cdf4efbf"
uuid = "2803e5a7-5153-5ecf-9a86-9b4c37f5f5ac"
version = "0.5.0"

[[ImageCore]]
deps = ["ColorTypes", "Colors", "FFTW", "FixedPointNumbers", "Graphics", "MappedArrays", "OffsetArrays", "PaddedViews", "Random", "Statistics", "Test"]
git-tree-sha1 = "5e7b1f49c80541860e08a7ea91805a24c1641f19"
uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534"
version = "0.7.3"

[[ImageDistances]]
deps = ["Colors", "Distances", "LinearAlgebra", "ProgressMeter", "Test"]
git-tree-sha1 = "a5de7b61f6fa98fb93c39857fa43cf40ca383b28"
uuid = "51556ac3-7006-55f5-8cb3-34580c88182d"
version = "0.1.1"

[[ImageFiltering]]
deps = ["CatIndices", "ColorVectorSpace", "Colors", "ComputationalResources", "DataStructures", "FFTViews", "FFTW", "FixedPointNumbers", "ImageCore", "LinearAlgebra", "Logging", "MappedArrays", "OffsetArrays", "Random", "StaticArrays", "Statistics", "Test", "TiledIteration"]
git-tree-sha1 = "9bb70bff423fb26b45817da5f127d71e662bfe50"
uuid = "6a3955dd-da59-5b1f-98d4-e7296123deb5"
version = "0.5.2"

[[ImageMagick]]
deps = ["BinaryProvider", "ColorTypes", "FileIO", "FixedPointNumbers", "ImageCore", "InteractiveUtils", "Libdl", "Pkg", "Random", "Test"]
git-tree-sha1 = "0e4cc77fb131061b3525a97fd7d483b253c3aaad"
uuid = "6218d12a-5da1-5696-b52f-db25d2ecc6d1"
version = "0.7.1"

[[ImageMetadata]]
deps = ["AxisArrays", "ColorVectorSpace", "Colors", "Dates", "FixedPointNumbers", "ImageAxes", "ImageCore", "IndirectArrays", "Statistics", "Test"]
git-tree-sha1 = "e8763955937114ea15cf3bfb5ae00588e19b58c3"
uuid = "bc367c6b-8a6b-528e-b4bd-a4b897500b49"
version = "0.5.2"

[[ImageMorphology]]
deps = ["ImageCore", "Test"]
git-tree-sha1 = "e94f43b9ff76f3a3810bfdd9b3d2fbcacbc26fd0"
uuid = "787d08f9-d448-5407-9aad-5290dd7ab264"
version = "0.1.1"

[[ImageShow]]
deps = ["Base64", "ColorTypes", "Colors", "FileIO", "FixedPointNumbers", "ImageCore", "OffsetArrays", "Requires", "Test"]
git-tree-sha1 = "98eb96a852fd2d6f0905cbe4d215ec2113805b46"
uuid = "4e3cecfd-b093-5904-9786-8bbb286a6a31"
version = "0.1.2"

[[ImageTransformations]]
deps = ["AxisAlgorithms", "ColorTypes", "ColorVectorSpace", "Colors", "CoordinateTransformations", "FixedPointNumbers", "IdentityRanges", "ImageCore", "Interpolations", "LinearAlgebra", "OffsetArrays", "StaticArrays", "Test"]
git-tree-sha1 = "18ae1c0a8df31549a9452ceac93751d4aa166071"
uuid = "02fcd773-0e25-5acc-982a-7f6622650795"
version = "0.7.1"

[[ImageView]]
deps = ["AxisArrays", "Cairo", "ColorVectorSpace", "Colors", "FileIO", "FixedPointNumbers", "Graphics", "Gtk", "GtkReactive", "Images", "MappedArrays", "RoundingIntegers", "StatsBase", "Test"]
git-tree-sha1 = "be3e41d030ad6792225814844dbe77e085006f42"
uuid = "86fae568-95e7-573e-a6b2-d8a6b900c9ef"
version = "0.8.2"

[[Images]]
deps = ["AxisArrays", "Base64", "ColorTypes", "ColorVectorSpace", "Colors", "FileIO", "FixedPointNumbers", "Graphics", "ImageAxes", "ImageCore", "ImageDistances", "ImageFiltering", "ImageMetadata", "ImageMorphology", "ImageShow", "ImageTransformations", "IndirectArrays", "LinearAlgebra", "MappedArrays", "OffsetArrays", "Random", "Reexport", "SIUnits", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "Test", "TiledIteration"]
git-tree-sha1 = "01291372b2c3a67191a8cc2ff291f33f5485ac8b"
uuid = "916415d5-f1e6-5110-898d-aaa5f9f070e0"
version = "0.17.0"

[[IndexableBitVectors]]
deps = ["Random", "Test"]
git-tree-sha1 = "b7f5e42dc867b8a8654a5f899064632dac05bc82"
uuid = "1cb3b9ac-1ffd-5777-9e6b-a3d42300664d"
version = "1.0.0"

[[IndirectArrays]]
deps = ["Compat", "Test"]
git-tree-sha1 = "b6e249be10a3381b2c72ac82f2d13d70067cb2bd"
uuid = "9b13fd28-a010-5f03-acff-a1bbcff69959"
version = "0.5.0"

[[Inflate]]
deps = ["Pkg", "Printf", "Random", "Test"]
git-tree-sha1 = "b7ec91c153cf8bff9aff58b39497925d133ef7fd"
uuid = "d25df0c9-e2be-5dd7-82c8-3ad0b3e990b9"
version = "0.1.1"

[[IniFile]]
deps = ["Test"]
git-tree-sha1 = "098e4d2c533924c921f9f9847274f2ad89e018b8"
uuid = "83e8ac13-25f8-5344-8a64-a9f2b223428f"
version = "0.5.0"

[[InspectDR]]
deps = ["Cairo", "Colors", "Graphics", "Gtk", "NumericIO", "Pkg", "Printf", "Random", "Test"]
git-tree-sha1 = "93db7c30ec473cfc11823a58f44cd544f009aea2"
uuid = "d0351b0e-4b05-5898-87b3-e2a8edfddd1d"
version = "0.3.3"

[[Interact]]
deps = ["CSSUtil", "DataStructures", "InteractBase", "InteractBulma", "JSON", "Knockout", "Observables", "Reexport", "Test", "WebIO", "Widgets"]
git-tree-sha1 = "102666d2d89a672c86bd33399a5f36c7e5d2b3b5"
uuid = "c601a237-2ae4-5e1e-952c-7a85b0c7eef1"
version = "0.9.0"

[[InteractBase]]
deps = ["Base64", "CSSUtil", "Colors", "DataStructures", "Dates", "JSExpr", "JSON", "Knockout", "Observables", "Random", "Test", "WebIO", "Widgets"]
git-tree-sha1 = "c831c36639b30177440f394e82ec7fd1a6b87bab"
uuid = "d3863d7c-f0c8-5437-a7b4-3ae773c01009"
version = "0.8.2"

[[InteractBulma]]
deps = ["InteractBase", "Reexport", "Test"]
git-tree-sha1 = "5dd3798331686a512ee98cc59a5b1f3d136cd926"
uuid = "7981ab7d-5bfa-5e03-9ec9-f3d4afc0a1ca"
version = "0.4.2"

[[InteractiveUtils]]
deps = ["LinearAlgebra", "Markdown"]
uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"

[[Interpolations]]
deps = ["AxisAlgorithms", "LinearAlgebra", "OffsetArrays", "Random", "Ratios", "SharedArrays", "SparseArrays", "StaticArrays", "Test", "WoodburyMatrices"]
git-tree-sha1 = "1ec5b78dbfb5ae2b3d7a4987a9287fed4cc31ded"
uuid = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59"
version = "0.11.1"

[[IntervalSets]]
deps = ["Compat"]
git-tree-sha1 = "9dc556002f23740de13946e8c2e41798e09a9249"
uuid = "8197267c-284f-5f27-9208-e0e47529a953"
version = "0.3.1"

[[IntervalTrees]]
deps = ["InteractiveUtils", "Profile", "Random", "Test"]
git-tree-sha1 = "6c9fcd87677231ae293f6806fad928c216ab6658"
uuid = "524e6230-43b7-53ae-be76-1e9e4d08d11b"
version = "1.0.0"

[[IterTools]]
deps = ["SparseArrays", "Test"]
git-tree-sha1 = "79246285c43602384e6f1943b3554042a3712056"
uuid = "c8e1da08-722c-5040-9ed9-7db0dc04731e"
version = "1.1.1"

[[IterableTables]]
deps = ["DataValues", "IteratorInterfaceExtensions", "Requires", "TableTraits", "TableTraitsUtils", "Test"]
git-tree-sha1 = "0eec91e8185899f3926f56db515559bfe95b9db7"
uuid = "1c8ee90f-4401-5389-894e-7a04a3dc0f4d"
version = "0.10.0"

[[IteratorInterfaceExtensions]]
deps = ["Test"]
git-tree-sha1 = "5484e5ede2a4137b9643f4d646e8e7b87b794415"
uuid = "82899510-4779-5014-852e-03e436cf321d"
version = "0.1.1"

[[JSExpr]]
deps = ["JSON", "MacroTools", "Observables", "Test", "WebIO"]
git-tree-sha1 = "013bc2143a2e84ea489365cf30db3407deb540c2"
uuid = "97c1335a-c9c5-57fe-bc5d-ec35cebe8660"
version = "0.5.0"

[[JSON]]
deps = ["Dates", "Distributed", "Mmap", "Sockets", "Test", "Unicode"]
git-tree-sha1 = "1f7a25b53ec67f5e9422f1f551ee216503f4a0fa"
uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "0.20.0"

[[Juno]]
deps = ["Base64", "Logging", "Media", "Profile", "Test"]
git-tree-sha1 = "ce6246e19061e36cbdce954caaae717498daeed8"
uuid = "e5e0dc1b-0480-54bc-9374-aad01c23163d"
version = "0.5.4"

[[KernelDensity]]
deps = ["Distributions", "FFTW", "Interpolations", "Optim", "StatsBase", "Test"]
git-tree-sha1 = "c1048817fe5711f699abc8fabd47b1ac6ba4db04"
uuid = "5ab0869b-81aa-558d-bb23-cbf5423bbe9b"
version = "0.5.1"

[[Knockout]]
deps = ["JSExpr", "JSON", "Observables", "Pkg", "Test", "WebIO"]
git-tree-sha1 = "63e5e0bd2e9923191c30bb1e3d6e4d579155ddfa"
uuid = "bcebb21b-c2e3-54f8-a781-646b90f6d2cc"
version = "0.2.0"

[[LNR]]
deps = ["Compat", "Lazy", "Test"]
git-tree-sha1 = "bae0010daaba5f122cefcbee9a97f5d82ea03e5c"
uuid = "7c4cb9fa-83a0-5386-9231-d6167c818060"
version = "0.2.0"

[[LaTeXStrings]]
deps = ["Compat"]
git-tree-sha1 = "7ab9b8788cfab2bdde22adf9004bda7ad9954b6c"
uuid = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f"
version = "1.0.3"

[[Lazy]]
deps = ["Compat", "MacroTools", "Test"]
git-tree-sha1 = "aec38c7e7f255a678af22651c74100e3cd39ea20"
uuid = "50d2b5c4-7a5e-59d5-8109-a42b560f39c0"
version = "0.13.2"

[[LibCURL]]
deps = ["BinaryProvider", "Compat", "Libdl", "Printf"]
git-tree-sha1 = "6339c87cb76923a3cf947fcd213cbc364355c9c9"
uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
version = "0.4.1"

[[LibExpat]]
deps = ["Compat"]
git-tree-sha1 = "fde352ec13479e2f90e57939da2440fb78c5e388"
uuid = "522f3ed2-3f36-55e3-b6df-e94fee9b0c07"
version = "0.5.0"

[[LibGit2]]
uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"

[[Libdl]]
uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[Libz]]
deps = ["BufferedStreams", "Random", "Test"]
git-tree-sha1 = "d405194ffc0293c3519d4f7251ce51baac9cc871"
uuid = "2ec943e9-cfe8-584d-b93d-64dcb6d567b7"
version = "1.0.0"

[[LightGraphs]]
deps = ["ArnoldiMethod", "Base64", "DataStructures", "DelimitedFiles", "Distributed", "Inflate", "LinearAlgebra", "Markdown", "Random", "SharedArrays", "SimpleTraits", "SparseArrays", "Statistics", "Test"]
git-tree-sha1 = "c7222c370d5cf6d4e08ae40bddd8c0db6852dfb1"
uuid = "093fc24a-ae57-5d10-9952-331d41423f4d"
version = "1.2.0"

[[LightXML]]
deps = ["BinaryProvider", "Libdl", "Test"]
git-tree-sha1 = "aeec7a341652d47bc773475a42952fa78eccd7cc"
uuid = "9c8b4983-aa76-5018-a973-4c85ecc9e179"
version = "0.8.0"

[[LineSearches]]
deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf", "Test"]
git-tree-sha1 = "54eb90e8dbe745d617c78dee1d6ae95c7f6f5779"
uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255"
version = "7.0.1"

[[LinearAlgebra]]
deps = ["Libdl"]
uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

[[Loess]]
deps = ["Distances", "Random", "Statistics", "Test"]
git-tree-sha1 = "0ee46caf683a422b595be4dfaed6cda28f541e25"
uuid = "4345ca2d-374a-55d4-8d30-97f9976e7612"
version = "0.5.0"

[[Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"

[[MIToS]]
deps = ["ArgParse", "AutoHashEquals", "Clustering", "CodecZlib", "DataStructures", "Dates", "DelimitedFiles", "Distributed", "FastaIO", "Formatting", "HTTP", "LightXML", "LinearAlgebra", "NamedArrays", "PairwiseListMatrices", "Pkg", "ProgressMeter", "Random", "RecipesBase", "Requires", "Serialization", "StaticArrays", "Statistics", "StatsBase", "Test", "TranscodingStreams"]
path = "/home/zea/.julia/dev/MIToS"
uuid = "51bafb47-8a16-5ded-8b04-24ef4eede0b5"
version = "2.3.3+"

[[MacroTools]]
deps = ["Compat"]
git-tree-sha1 = "c443e1c8d58a4e9f61b708ad0a88286c7042145b"
uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
version = "0.4.4"

[[MappedArrays]]
deps = ["Test"]
git-tree-sha1 = "923441c5ac942b60bd3a842d5377d96646bcbf46"
uuid = "dbb5928d-eab1-5f90-85c2-b9b0edb7c900"
version = "0.2.1"

[[Markdown]]
deps = ["Base64"]
uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"

[[MbedTLS]]
deps = ["BinaryProvider", "Dates", "Libdl", "Random", "Sockets", "Test"]
git-tree-sha1 = "c93a87da4081a3de781f34e0540175795a2ce83d"
uuid = "739be429-bea8-5141-9913-cc70e7f3736d"
version = "0.6.6"

[[Measures]]
deps = ["Test"]
git-tree-sha1 = "ddfd6d13e330beacdde2c80de27c1c671945e7d9"
uuid = "442fdcdd-2543-5da2-b0f3-8c86c306513e"
version = "0.3.0"

[[Media]]
deps = ["MacroTools", "Test"]
git-tree-sha1 = "75a54abd10709c01f1b86b84ec225d26e840ed58"
uuid = "e89f7d12-3494-54d1-8411-f7d8b9ae1f27"
version = "0.5.0"

[[Missings]]
deps = ["Dates", "InteractiveUtils", "SparseArrays", "Test"]
git-tree-sha1 = "d1d2585677f2bd93a97cfeb8faa7a0de0f982042"
uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
version = "0.4.0"

[[Mmap]]
uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[Mustache]]
deps = ["Printf", "Tables", "Test"]
git-tree-sha1 = "9a548a873a8de9f982284817b89ae0c5faa5a80b"
uuid = "ffc61752-8dc7-55ee-8c37-f3e9cdd09e70"
version = "0.5.10"

[[Mux]]
deps = ["AssetRegistry", "Base64", "HTTP", "Hiccup", "Lazy", "Pkg", "Sockets", "Test", "WebSockets"]
git-tree-sha1 = "487feb060cdd5cc152ef4f75b3cb565c0dc4300a"
uuid = "a975b10e-0019-58db-a62f-e48ff68538c9"
version = "0.5.3"

[[NLSolversBase]]
deps = ["Calculus", "DiffEqDiffTools", "DiffResults", "Distributed", "ForwardDiff", "LinearAlgebra", "Random", "SparseArrays", "Test"]
git-tree-sha1 = "5a1d1b047ffb18eb72cc898245eaef3e2dd63762"
uuid = "d41bc354-129a-5804-8e4c-c37616107c6c"
version = "7.1.2"

[[NaNMath]]
deps = ["Compat"]
git-tree-sha1 = "ce3b85e484a5d4c71dd5316215069311135fa9f2"
uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
version = "0.3.2"

[[NamedArrays]]
deps = ["Combinatorics", "DataStructures", "DelimitedFiles", "LinearAlgebra", "Random", "Requires", "SparseArrays", "Statistics", "Test"]
git-tree-sha1 = "977c65d68cee14ab28198e89ebc125d0738ef250"
uuid = "86f7a689-2022-50b4-a561-43c23ac3c673"
version = "0.9.2"

[[NearestNeighbors]]
deps = ["Distances", "LinearAlgebra", "Mmap", "StaticArrays", "Test"]
git-tree-sha1 = "f47c5d97cf9a8caefa47e9fa9d99d8fda1a65154"
uuid = "b8a86587-4115-5ab1-83bc-aa920d37bbce"
version = "0.4.3"

[[NetworkLayout]]
deps = ["DelimitedFiles", "GeometryTypes", "LinearAlgebra", "SparseArrays", "Test"]
git-tree-sha1 = "adde9ad01842a4f62c3724b8707bed90293f0f3f"
uuid = "46757867-2c16-5918-afeb-47bfcb05e46a"
version = "0.2.0"

[[NumericIO]]
deps = ["Printf", "Test"]
git-tree-sha1 = "eacd69d8b2b97b6689d9d9bf829de57409b063e3"
uuid = "6c575b1c-77cb-5640-a5dc-a54116c90507"
version = "0.3.0"

[[ORCA]]
deps = ["Conda", "HTTP", "JSON", "PlotlyBase", "Test"]
git-tree-sha1 = "8b5d61c0a8ec3390f4d3c7c085170eec9be187cf"
uuid = "47be7bcc-f1a6-5447-8b36-7eeeff7534fd"
version = "0.2.0"

[[Observables]]
deps = ["Test"]
git-tree-sha1 = "dc02cec22747d1d10d9f70d8a1c03432b5bfbcd0"
uuid = "510215fc-4207-5dde-b226-833fc4488ee2"
version = "0.2.3"

[[OffsetArrays]]
deps = ["DelimitedFiles", "Test"]
git-tree-sha1 = "7d1442cb06fbfbc4fea936c3c56b38daffd22d3b"
uuid = "6fe1bfb0-de20-5000-8ca7-80f57d26f881"
version = "0.9.1"

[[Optim]]
deps = ["Calculus", "DiffEqDiffTools", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "Random", "SparseArrays", "StatsBase", "Test"]
git-tree-sha1 = "0f2a6c6ff9db396cc7af15bb1cf057a26662ff17"
uuid = "429524aa-4258-5aef-a3af-852621145aeb"
version = "0.17.2"

[[OrderedCollections]]
deps = ["Random", "Serialization", "Test"]
git-tree-sha1 = "85619a3f3e17bb4761fe1b1fd47f0e979f964d5b"
uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.0.2"

[[PDMats]]
deps = ["Arpack", "LinearAlgebra", "SparseArrays", "SuiteSparse", "Test"]
git-tree-sha1 = "b6c91fc0ab970c0563cbbe69af18d741a49ce551"
uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
version = "0.9.6"

[[PGFPlots]]
deps = ["ColorBrewer", "Colors", "Contour", "DataFrames", "Discretizers", "Distributed", "ImageMagick", "Images", "IndirectArrays", "Printf", "StatsBase", "Test", "TikzPictures"]
git-tree-sha1 = "8c62a411e1570b403b0ba61dc37b5b821254cac8"
uuid = "3b7a836e-365b-5785-a47d-02c71176b4aa"
version = "3.0.3"

[[Packing]]
deps = ["GeometryTypes", "Test"]
git-tree-sha1 = "bc7c284233cf0518933bf9977e3e8234efcc1c30"
uuid = "19eb6ba3-879d-56ad-ad62-d5c202156566"
version = "0.3.0"

[[PaddedViews]]
deps = ["OffsetArrays", "Test"]
git-tree-sha1 = "7da3e7e1a58cffbf10177553ae95f17b92516912"
uuid = "5432bcbf-9aad-5242-b902-cca2824c8663"
version = "0.4.2"

[[PairwiseListMatrices]]
deps = ["DelimitedFiles", "LinearAlgebra", "NamedArrays", "Pkg", "RecipesBase", "Statistics", "Test"]
git-tree-sha1 = "41e458358f9694097c39d6f9fbb9558f3cdf539f"
repo-rev = "master"
repo-url = "https://github.com/diegozea/PairwiseListMatrices.jl.git"
uuid = "f9da4da7-9382-5435-b973-175f5d8dfb32"
version = "0.7.0+"

[[Parameters]]
deps = ["Markdown", "OrderedCollections", "REPL", "Test"]
git-tree-sha1 = "70bdbfb2bceabb15345c0b54be4544813b3444e4"
uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a"
version = "0.10.3"

[[Parsers]]
deps = ["Dates", "Mmap", "Test", "WeakRefStrings"]
git-tree-sha1 = "400aaa49532991f8e31d13f87c6eeaeee83663d4"
uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
version = "0.2.16"

[[Pidfile]]
deps = ["FileWatching", "Test"]
git-tree-sha1 = "1ffd82728498b5071cde851bbb7abd780d4445f3"
uuid = "fa939f87-e72e-5be4-a000-7fc836dbe307"
version = "1.1.0"

[[Pkg]]
deps = ["Dates", "LibGit2", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"]
uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"

[[PlotRecipes]]
deps = ["InteractiveUtils", "LightGraphs", "LinearAlgebra", "NetworkLayout", "PlotUtils", "RecipesBase", "SparseArrays", "Statistics", "Test"]
path = "/home/zea/.julia/dev/PlotRecipes"
uuid = "0e44f1d2-4516-5e7d-9182-378ae59e766c"
version = "0.3.0+"

[[PlotThemes]]
deps = ["PlotUtils", "Requires", "Test"]
git-tree-sha1 = "f3afd2d58e1f6ac9be2cea46e4a9083ccc1d990b"
uuid = "ccf2f8ad-2431-5c83-bf29-c5338b663b6a"
version = "0.3.0"

[[PlotUtils]]
deps = ["Colors", "Dates", "Printf", "Random", "Reexport", "Test"]
git-tree-sha1 = "fd28f30a294a38ec847de95d8ac7ac916ccd7c06"
uuid = "995b91a9-d308-5afd-9ec6-746e21dbc043"
version = "0.5.5"

[[PlotlyBase]]
deps = ["Dates", "DelimitedFiles", "DocStringExtensions", "JSON", "LaTeXStrings", "Logging", "Requires", "Statistics", "Test", "UUIDs"]
git-tree-sha1 = "685c331de7712539c1f0d06e061fe57320bba5c9"
uuid = "a03496cd-edff-5a9b-9e67-9cda94a718b5"
version = "0.2.5"

[[PlotlyJS]]
deps = ["Blink", "Compat", "DelimitedFiles", "JSExpr", "JSON", "Markdown", "Pkg", "PlotlyBase", "REPL", "Reexport", "Requires", "Test", "WebIO"]
git-tree-sha1 = "1ffdd0b0062c08137cbd553284c1906ab46380db"
uuid = "f0f68f2c-4968-5e81-91da-67840de0976a"
version = "0.12.3"

[[Plots]]
deps = ["Base64", "Contour", "Dates", "FixedPointNumbers", "GR", "JSON", "LinearAlgebra", "Measures", "NaNMath", "Pkg", "PlotThemes", "PlotUtils", "Printf", "REPL", "Random", "RecipesBase", "Reexport", "Requires", "Showoff", "SparseArrays", "StaticArrays", "Statistics", "StatsBase", "Test", "UUIDs"]
git-tree-sha1 = "40e65916a51e3d6fc53f031a3f0ef2fd46e5d442"
uuid = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
version = "0.22.5"

[[Polynomials]]
deps = ["LinearAlgebra", "SparseArrays", "Test"]
git-tree-sha1 = "62142bd65d3f8aeb2226ec64dd8493349147df94"
uuid = "f27b6e38-b328-58d1-80ce-0feddd5e7a45"
version = "0.5.2"

[[PositiveFactorizations]]
deps = ["LinearAlgebra", "Test"]
git-tree-sha1 = "86ae7329c4b5c266acf5c7c524a972300d991e1c"
uuid = "85a6dd25-e78a-55b7-8502-1745935b8125"
version = "0.2.1"

[[Printf]]
deps = ["Unicode"]
uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"

[[Profile]]
deps = ["Printf"]
uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79"

[[ProfileView]]
deps = ["Cairo", "Colors", "FileIO", "Graphics", "Gtk", "GtkReactive", "InteractiveUtils", "IntervalSets", "Profile", "UUIDs"]
git-tree-sha1 = "5943d68015219a58bf4d949c20b89f1db558c963"
uuid = "c46f51b8-102a-5cf2-8d2c-8597cb0e0da7"
version = "0.4.0"

[[ProgressMeter]]
deps = ["Distributed", "Printf", "Random", "Test"]
git-tree-sha1 = "48058bc11607676e5bbc0b974af79106c6200787"
uuid = "92933f4c-e287-5a05-a399-4b506db050ca"
version = "0.9.0"

[[PyCall]]
deps = ["Compat", "Conda", "MacroTools", "Statistics", "VersionParsing"]
git-tree-sha1 = "ce4681263f41d98b3faf6107b28284bf8b866f5f"
uuid = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
version = "1.18.5"

[[PyPlot]]
deps = ["Colors", "Compat", "LaTeXStrings", "PyCall", "VersionParsing"]
git-tree-sha1 = "dd9f4a0bba3933f907640a567e1ce2a8ab44c58c"
uuid = "d330b81b-6aea-500a-939a-2ce795aea3ee"
version = "2.7.0"

[[QuadGK]]
deps = ["DataStructures", "LinearAlgebra", "Test"]
git-tree-sha1 = "3ce467a8e76c6030d4c3786e7d3a73442017cdc0"
uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
version = "2.0.3"

[[REPL]]
deps = ["InteractiveUtils", "Markdown", "Sockets"]
uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"

[[ROCAnalysis]]
deps = ["DataFrames", "LinearAlgebra", "Random", "Requires", "SpecialFunctions", "Test"]
git-tree-sha1 = "fed3f005bb6d4a39f848b7f713cf83c820d7bea4"
uuid = "f535d66d-59bb-5153-8d2b-ef0a426c6aff"
version = "0.3.0"

[[Random]]
deps = ["Serialization"]
uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"

[[RangeArrays]]
deps = ["Compat"]
git-tree-sha1 = "d925adfd5b01cb46fde89dc9548d167b3b136f4a"
uuid = "b3c3ace0-ae52-54e7-9d0b-2c1406fd6b9d"
version = "0.3.1"

[[Ratios]]
deps = ["Compat"]
git-tree-sha1 = "fd159bead0a24e6270fd0573a340312bd4645cc2"
uuid = "c84ed2f1-dad5-54f0-aa8e-dbefe2724439"
version = "0.3.0"

[[Reactive]]
deps = ["DataStructures", "Distributed", "Test"]
git-tree-sha1 = "5862d915387ebb954016f50a88e34f79a9e5fcd2"
uuid = "a223df75-4e93-5b7c-acf9-bdd599c0f4de"
version = "0.8.3"

[[RecipesBase]]
deps = ["Random", "Test"]
git-tree-sha1 = "0b3cb370ee4dc00f47f1193101600949f3dcf884"
uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
version = "0.6.0"

[[Reexport]]
deps = ["Pkg"]
git-tree-sha1 = "7b1d07f411bc8ddb7977ec7f377b97b158514fe0"
uuid = "189a3867-3050-52da-a836-e630ba90ab69"
version = "0.2.0"

[[Requires]]
deps = ["Test"]
git-tree-sha1 = "f6fbf4ba64d295e146e49e021207993b6b48c7d1"
uuid = "ae029012-a4dd-5104-9daa-d747884805df"
version = "0.5.2"

[[Rmath]]
deps = ["BinaryProvider", "Libdl", "Random", "Statistics", "Test"]
git-tree-sha1 = "9a6c758cdf73036c3239b0afbea790def1dabff9"
uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa"
version = "0.5.0"

[[Rotations]]
deps = ["LinearAlgebra", "Random", "StaticArrays", "Statistics", "Test"]
git-tree-sha1 = "ffcdd81d77b333ad0507aa4d021f61a461b6681d"
uuid = "6038ab10-8711-5258-84ad-4b1120ba62dc"
version = "0.10.0"

[[RoundingIntegers]]
deps = ["Test"]
git-tree-sha1 = "293ba0ab32218b9ffd596040224228def84f8da0"
uuid = "d5f540fe-1c90-5db3-b776-2e2f362d9394"
version = "0.2.0"

[[SHA]]
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"

[[SIUnits]]
deps = ["Compat", "TexExtensions"]
git-tree-sha1 = "224d83b62711fe7e429454aace2c97eb2cf36031"
uuid = "b9d75638-96e3-5676-bdf0-e9c958f63a55"
version = "0.1.0"

[[Serialization]]
uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"

[[SharedArrays]]
deps = ["Distributed", "Mmap", "Random", "Serialization"]
uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383"

[[Showoff]]
deps = ["Compat"]
git-tree-sha1 = "276b24f3ace98bec911be7ff2928d497dc759085"
uuid = "992d4aef-0814-514b-bc4d-f2e9a6c4116f"
version = "0.2.1"

[[SignedDistanceFields]]
deps = ["Random", "Statistics", "Test"]
git-tree-sha1 = "d263a08ec505853a5ff1c1ebde2070419e3f28e9"
uuid = "73760f76-fbc4-59ce-8f25-708e95d2df96"
version = "0.4.0"

[[SimpleTraits]]
deps = ["InteractiveUtils", "MacroTools", "Test"]
git-tree-sha1 = "c0a542b8d5e369b179ccd296b2ca987f6da5da0a"
uuid = "699a6c99-e7fa-54fc-8d76-47d257e15c1d"
version = "0.8.0"

[[Sockets]]
uuid = "6462fe0b-24de-5631-8697-dd941f90decc"

[[SoftGlobalScope]]
deps = ["Test"]
git-tree-sha1 = "99e323ab05adfc057b0e8058c6bd90d19052c0a6"
uuid = "b85f4697-e234-5449-a836-ec8e2f98b302"
version = "1.0.9"

[[SortingAlgorithms]]
deps = ["DataStructures", "Random", "Test"]
git-tree-sha1 = "03f5898c9959f8115e30bc7226ada7d0df554ddd"
uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c"
version = "0.3.1"

[[SparseArrays]]
deps = ["LinearAlgebra", "Random"]
uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[SpecialFunctions]]
deps = ["BinDeps", "BinaryProvider", "Libdl", "Test"]
git-tree-sha1 = "0b45dc2e45ed77f445617b99ff2adf0f5b0f23ea"
uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
version = "0.7.2"

[[StatPlots]]
deps = ["Clustering", "DataStructures", "DataValues", "Distributions", "IterableTables", "KernelDensity", "Observables", "Plots", "RecipesBase", "Reexport", "StatsBase", "TableTraits", "TableTraitsUtils", "Test", "Widgets"]
git-tree-sha1 = "245c50f8a6534bb16ada031e064363f8298b61b9"
uuid = "60ddc479-9b66-56df-82fc-76a74619b69c"
version = "0.9.2"

[[StaticArrays]]
deps = ["InteractiveUtils", "LinearAlgebra", "Random", "Statistics", "Test"]
git-tree-sha1 = "1eb114d6e23a817cd3e99abc3226190876d7c898"
uuid = "90137ffa-7385-5640-81b9-e52037218182"
version = "0.10.2"

[[Statistics]]
deps = ["LinearAlgebra", "SparseArrays"]
uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"

[[StatsBase]]
deps = ["DataStructures", "DelimitedFiles", "LinearAlgebra", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "Test"]
git-tree-sha1 = "7b596062316c7d846b67bf625d5963a832528598"
uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
version = "0.27.0"

[[StatsFuns]]
deps = ["Rmath", "SpecialFunctions", "Test"]
git-tree-sha1 = "d14bb7b03defd2deaa5675646f6783089e0556f0"
uuid = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
version = "0.7.0"

[[StatsMakie]]
deps = ["AbstractPlotting", "Distributions", "FileIO", "FreqTables", "IntervalSets", "KernelDensity", "Loess", "NamedArrays", "Observables", "OrderedCollections", "Random", "Statistics", "StatsBase", "StructArrays", "Tables", "Test", "Widgets"]
git-tree-sha1 = "d6aeb5066c20d3e37cec7e06bd7be271c3d0074c"
uuid = "65254759-4cff-5aa5-8326-61ce017a8c70"
version = "0.0.2"

[[StringDistances]]
deps = ["Distances", "IterTools", "Test"]
git-tree-sha1 = "2d9e7e22e842da878744331de6895c504124021d"
uuid = "88034a9c-02f8-509d-84a9-84ec65e18404"
version = "0.3.1"

[[StructArrays]]
deps = ["Requires", "Test"]
git-tree-sha1 = "a04ebea1d50e1f5363c75d651369bf7671572202"
uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a"
version = "0.2.0"

[[SuiteSparse]]
deps = ["Libdl", "LinearAlgebra", "SparseArrays"]
uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9"

[[TableTraits]]
deps = ["IteratorInterfaceExtensions", "Test"]
git-tree-sha1 = "eba4b1d0a82bdd773307d652c6e5f8c82104c676"
uuid = "3783bdb8-4a98-5b6b-af9a-565f29a5fe9c"
version = "0.4.1"

[[TableTraitsUtils]]
deps = ["DataValues", "IteratorInterfaceExtensions", "Missings", "TableTraits", "Test"]
git-tree-sha1 = "a355f1882d64881a11f853e64dcc353975c4df6e"
uuid = "382cd787-c1b6-5bf2-a167-d5b971a19bda"
version = "0.3.1"

[[Tables]]
deps = ["IteratorInterfaceExtensions", "Requires", "TableTraits", "Test"]
git-tree-sha1 = "89f8fde6394579580fb75088e45ad95551199c7c"
uuid = "bd369af6-aec1-5ad0-b16a-f7cc5008161c"
version = "0.1.14"

[[Test]]
deps = ["Distributed", "InteractiveUtils", "Logging", "Random"]
uuid = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[[TexExtensions]]
deps = ["Compat"]
git-tree-sha1 = "092ad55ed044aa5ab31ee800d4ae5bec526a8f09"
uuid = "9b435220-3ad3-5d4f-b1ea-1e7b29ae9b13"
version = "0.1.0"

[[TextWrap]]
deps = ["Compat", "Test"]
git-tree-sha1 = "8355cc559e85469cd4dbe927c375f61d3750e002"
uuid = "b718987f-49a8-5099-9789-dcd902bef87d"
version = "0.3.0"

[[TikzPictures]]
deps = ["LaTeXStrings", "Test"]
git-tree-sha1 = "ac56bb1d22f3d11a835c5fbb486f180be5d2097d"
uuid = "37f6aa50-8035-52d0-81c2-5a1d08754b2d"
version = "3.0.4"

[[TiledIteration]]
deps = ["OffsetArrays", "Test"]
git-tree-sha1 = "58f6f07d3b54a363ec283a8f5fc9fb4ecebde656"
uuid = "06e1c1a7-607b-532d-9fad-de7d9aa2abac"
version = "0.2.3"

[[Tokenize]]
deps = ["Printf", "Test"]
git-tree-sha1 = "3e83f60b74911d3042d3550884ca2776386a02b8"
uuid = "0796e94c-ce3b-5d07-9a54-7f471281c624"
version = "0.5.3"

[[Traceur]]
deps = ["Cassette", "InteractiveUtils", "Logging", "MacroTools", "Test"]
git-tree-sha1 = "ecfb8c917712ff5b787e2d837f2d5808c880a642"
uuid = "37b6cedf-1f77-55f8-9503-c64b63398394"
version = "0.2.1"

[[TranscodingStreams]]
deps = ["Pkg", "Random", "Test"]
git-tree-sha1 = "a34a2d588e2d2825602bf14a24216d5c8b0921ec"
uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa"
version = "0.8.1"

[[TreeViews]]
deps = ["Test"]
git-tree-sha1 = "8d0d7a3fe2f30d6a7f833a5f19f7c7a5b396eae6"
uuid = "a2a6695c-b41b-5b7d-aed9-dbfdeacea5d7"
version = "0.3.0"

[[Twiddle]]
deps = ["Test"]
git-tree-sha1 = "45a81952077aaf0396c3ddcbd561e660a44ce331"
uuid = "7200193e-83a8-5a55-b20d-5d36d44a0795"
version = "1.1.0"

[[URIParser]]
deps = ["Test", "Unicode"]
git-tree-sha1 = "6ddf8244220dfda2f17539fa8c9de20d6c575b69"
uuid = "30578b45-9adc-5946-b283-645ec420af67"
version = "0.4.0"

[[UUIDs]]
deps = ["Random"]
uuid = "cf7118a7-6976-5b1a-9a39-7adc72f591a4"

[[Unicode]]
uuid = "4ec0a83e-493e-50e2-b9ac-8f72acf5a8f5"

[[UnicodeFun]]
deps = ["Test"]
git-tree-sha1 = "63cbbd00217fc9aafedf055b60459c1ae7e01ecc"
uuid = "1cfade01-22cf-5700-b092-accc4b62d6e1"
version = "0.4.0"

[[UnicodePlots]]
deps = ["Dates", "Random", "SparseArrays", "StatsBase", "Test"]
git-tree-sha1 = "378d1f24d0b3ad0cf1f9049b50af03989e633379"
uuid = "b8865327-cd53-5732-bb35-84acbb429228"
version = "1.0.1"

[[VersionParsing]]
deps = ["Compat"]
git-tree-sha1 = "c9d5aa108588b978bd859554660c8a5c4f2f7669"
uuid = "81def892-9a0e-5fdd-b105-ffc91e053289"
version = "1.1.3"

[[WeakRefStrings]]
deps = ["Missings", "Random", "Test"]
git-tree-sha1 = "1a9511b00152bbecaf3cd59d1fadd5d23e7bb1f9"
uuid = "ea10d353-3f73-51f8-a26c-33c1cb351aa5"
version = "0.5.4"

[[WebIO]]
deps = ["AssetRegistry", "Base64", "Compat", "FunctionalCollections", "JSON", "Logging", "Observables", "Random", "Requires", "Sockets", "Test", "UUIDs", "Widgets"]
git-tree-sha1 = "c1f259d4c23f12262f4fa69263a4e54fbea77450"
uuid = "0f1e0344-ec1d-5b48-a673-e5cf874b6c29"
version = "0.7.0"

[[WebSockets]]
deps = ["Base64", "Dates", "Distributed", "HTTP", "Logging", "MbedTLS", "Random", "Sockets", "Test"]
git-tree-sha1 = "86d48ad45a897278723b060134d26545e19d0ac2"
uuid = "104b5d7c-a370-577a-8038-80a2059c5097"
version = "1.2.0"

[[Widgets]]
deps = ["Observables", "OrderedCollections", "Test"]
git-tree-sha1 = "c928228be493bab724f5ae35a38fb1415ae5cee9"
uuid = "cc8bc4a8-27d6-5769-a93b-9d913e69aa62"
version = "0.4.4"

[[WinRPM]]
deps = ["BinDeps", "Compat", "HTTPClient", "LibExpat", "Libdl", "Libz", "URIParser"]
git-tree-sha1 = "2a889d320f3b77d17c037f295859fe570133cfbf"
uuid = "c17dfb99-b4f7-5aad-8812-456da1ad7187"
version = "0.4.2"

[[WoodburyMatrices]]
deps = ["LinearAlgebra", "Random", "SparseArrays", "Test"]
git-tree-sha1 = "21772c33b447757ec7d3e61fcdfb9ea5c47eedcf"
uuid = "efce3f68-66dc-5838-9240-27a6d6f5f9b6"
version = "0.4.1"

[[YAML]]
deps = ["Codecs", "Compat"]
git-tree-sha1 = "3bde77cee95cce0c0b9b18813d85e18e8ed4f415"
uuid = "ddb6d928-2868-570f-bddf-ab3f9cf99eb6"
version = "0.3.2"

[[ZMQ]]
deps = ["BinaryProvider", "FileWatching", "Libdl", "Sockets", "Test"]
git-tree-sha1 = "34e7ac2d1d59d19d0e86bde99f1f02262bfa1613"
uuid = "c2297ded-f4af-51ae-bb23-16f91089e4e1"
version = "1.0.0"
~/.julia/environments/v1.0$ cat Project.toml 
[deps]
ArgParse = "c7e460c6-2fb9-53a9-8c5b-16f535851c63"
Atom = "c52e3926-4ff0-5f6e-af25-54175e0327b1"
BenchmarkTools = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf"
Bio3DView = "e334fcbd-ee6d-558c-86ec-56a3c546e5fa"
BioAlignments = "00701ae9-d1dc-5365-b64a-a3a3ebf5695e"
BioSequences = "7e6ae17a-c86d-528c-b3b9-7f778a29fe59"
BioSymbols = "3c28c6f8-a34d-59c4-9654-267d177fcfa9"
CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
DataStructures = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
DeepDiffs = "ab62b9b5-e342-54a8-a765-a90f495de1a6"
Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
FileIO = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
Format = "1fa38f19-a742-5d3f-a2b9-30dd87b9d5f8"
Formatting = "59287772-0a20-5a39-b81b-1366585eb4c0"
GR = "28b8d3ca-fb5f-59d9-8090-bfdbd6d07a71"
GaussDCA = "92cae0f8-736c-5811-a1a9-a89e38a991ed"
Glob = "c27321d9-0574-5035-807b-f59d2c89b15c"
GraphRecipes = "bd48cda9-67a9-57be-86fa-5b3c104eda73"
Graphics = "a2bd30eb-e257-5431-a919-1863eab51364"
Gtk = "4c0ca9eb-093a-5379-98c5-f87ac0bbbf44"
IJulia = "7073ff75-c697-5162-941a-fcdaad2a7d2a"
IPython = "18364772-b071-5c00-bfd7-ceeaffab630a"
ImageMagick = "6218d12a-5da1-5696-b52f-db25d2ecc6d1"
ImageView = "86fae568-95e7-573e-a6b2-d8a6b900c9ef"
Images = "916415d5-f1e6-5110-898d-aaa5f9f070e0"
InspectDR = "d0351b0e-4b05-5898-87b3-e2a8edfddd1d"
Interact = "c601a237-2ae4-5e1e-952c-7a85b0c7eef1"
Juno = "e5e0dc1b-0480-54bc-9374-aad01c23163d"
LaTeXStrings = "b964fa9f-0449-5b57-a5c2-d3ea65f4040f"
MIToS = "51bafb47-8a16-5ded-8b04-24ef4eede0b5"
NamedArrays = "86f7a689-2022-50b4-a561-43c23ac3c673"
ORCA = "47be7bcc-f1a6-5447-8b36-7eeeff7534fd"
PGFPlots = "3b7a836e-365b-5785-a47d-02c71176b4aa"
PairwiseListMatrices = "f9da4da7-9382-5435-b973-175f5d8dfb32"
PlotRecipes = "0e44f1d2-4516-5e7d-9182-378ae59e766c"
PlotlyJS = "f0f68f2c-4968-5e81-91da-67840de0976a"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
ProfileView = "c46f51b8-102a-5cf2-8d2c-8597cb0e0da7"
PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
PyPlot = "d330b81b-6aea-500a-939a-2ce795aea3ee"
ROCAnalysis = "f535d66d-59bb-5153-8d2b-ef0a426c6aff"
RecipesBase = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
StatPlots = "60ddc479-9b66-56df-82fc-76a74619b69c"
StatsMakie = "65254759-4cff-5aa5-8326-61ce017a8c70"
StringDistances = "88034a9c-02f8-509d-84a9-84ec65e18404"
Traceur = "37b6cedf-1f77-55f8-9503-c64b63398394"
UnicodePlots = "b8865327-cd53-5732-bb35-84acbb429228"