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JulianSpagnuolo / FACkit

FACkit is a complete R toolkit providing transformation, data-exploration, dimensional-reduction and clustering methods tailored to semi-automated analysis of FACS data
GNU General Public License v3.0
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Fix short-circuiting in cell state network graph #4

Open JulianSpagnuolo opened 7 years ago

JulianSpagnuolo commented 7 years ago

Find better method to model the main clusters in Diffusion Space as a graph network and maintain branches to prevent short-circuits created by 2 cell-states stemming off the same root node (but are in different branches).

JulianSpagnuolo commented 7 years ago

TSCAN package has function to perform pseudo ordering, which has been implemented in FACkit but not uploaded to github.