Closed JustinChu closed 6 years ago
Currently if you alter https://github.com/JustinChu/JupiterPlot/blob/master/config/rawConf.conf#L29 to prevent masking of the placeholder names. Then you can convert them using the prefix.scaffold.txt file but this should be made a lot easier for diagnostic purposes.
prefix.scaffold.txt
prefix.scaffold is retired and is supplanted by prefix.seqOrder.txt.
Currently if you alter https://github.com/JustinChu/JupiterPlot/blob/master/config/rawConf.conf#L29 to prevent masking of the placeholder names. Then you can convert them using the
prefix.scaffold.txt
file but this should be made a lot easier for diagnostic purposes.