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Jwindler / AutoHiC

A novel genome assembly pipeline based on deep learning
https://doi.org/10.1093/nar/gkae789
MIT License
48 stars 5 forks source link

Error: undefined symbol: EVP_md2 #35

Open suncpark opened 3 days ago

suncpark commented 3 days ago

Thank you for your efforts.

I conda-installed in HPC. while running, I encountered this error below. Gemini says "AutoHiC program is trying to use a function called EVP_md2 from a version of OpenSSL (3.0.0 in this case) that doesn't include that function." Any suggestions? Thanks

Traceback (most recent call last): File "/90daydata/spcl_sun/AutoHiC/autohic.py", line 19, in from src.assembly.adjust_all_error import adjust_all_error File "/90daydata/spcl_sun/AutoHiC/src/assembly/adjust_all_error.py", line 16, in from src.assembly.cut_errors_ctg import cut_errors_ctg File "/90daydata/spcl_sun/AutoHiC/src/assembly/cut_errors_ctg.py", line 15, in from src.utils.get_cfg import get_ratio File "/90daydata/spcl_sun/AutoHiC/src/utils/get_cfg.py", line 17, in import hicstraw ImportError: /lib64/libldap.so.2: undefined symbol: EVP_md2, version OPENSSL_3.0.0

Jwindler commented 2 days ago

maybe this error should contact your hpc manager to slove. you also can use singularity to use AutoHiC.