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KCL-BMEIS / niftyreg

This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utilities
BSD 3-Clause "New" or "Revised" License
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Error: unknown parameter in reg_f3d #46

Closed fepegar closed 5 years ago

fepegar commented 5 years ago

According to the help, one can use reg_f3d with CUDA by specifying -platf 1. However, this parameter is not recognised.

$ reg_f3d -ref ../aylj_t1_post.nii.gz -flo mirror_image_left.nii.gz -res left_on_post_reg.nii.gz -platf 1
[reg_f3d] 
[reg_f3d] Command line:
[reg_f3d]    reg_f3d -ref ../aylj_t1_post.nii.gz -flo mirror_image_left.nii.gz -res left_on_post_reg.nii.gz -platf 1
[reg_f3d] 
[NiftyReg ERROR]    Parameter unknown:
[NiftyReg ERROR] -platf

This parameter is captured by reg_aladin https://github.com/KCL-BMEIS/niftyreg/blob/62dc6106481a9b47fa4c4ff60bb41ff7ce867499/reg-apps/reg_aladin.cpp#L352 but not by reg_f3d, despite the help message https://github.com/KCL-BMEIS/niftyreg/blob/62dc6106481a9b47fa4c4ff60bb41ff7ce867499/reg-apps/reg_f3d.cpp#L134-L143

Can reg_f3d use CUDA?

mmodat commented 5 years ago

It cannot anymore. We will re-activate it after some large refactoring. It should not be in the help, will remove it.