KChen-lab / Monopogen

SNV calling from single cell sequencing
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Somatic Module on multiple chromosomes #64

Open Arsamat opened 1 month ago

Arsamat commented 1 month ago

Hi, I found in the documentation that we can run somatic steps on multiple chromosomes in parallel by including them in the .lst file. However, from my understanding, each of them has to have its own reference GRCh38 file and seems like I can provide only one reference file per command. Is that observation correct?