Open HauHe opened 2 years ago
Since you work on Windows, I assume this works @trevorb1?
My computer is Windows, but I work in a Linux shell for coding. So I haven't tested the workflow on Windows before, @HauHe. :(
Ah, damn, well I will see if it works later when trying to run it on our workstation...
So, not sure if the issue is still subprocess related. In any case it now fail both when flagging glpk
as solver and when flagging gurobi
. In both case the lp-file for step_0 is created but it does not manage to run it. I thought it might be related to the copying of the osemosys file when running with glpk, but since the error seems the same with gurobi, I'm not sure...
It seems like on Windows the calling of snakemake from the python script via subprocess doesn't work. A solution that works on Unix and Windows would be desirable.