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KalinNonchev / gnomAD_DB

This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.
MIT License
35 stars 10 forks source link

conda test CircleCI received exit code 137 #16

Closed KalinNonchev closed 1 year ago

KalinNonchev commented 2 years ago

Fix build-and-test It fails due to OOM https://github.com/KalinNonchev/gnomAD_DB/blob/master/.circleci/config.yml

KalinNonchev commented 2 years ago

it was solved in commit 4fdc20979915e9d717283cd4a3956dc154f9ba5a

KalinNonchev commented 1 year ago

still open

KalinNonchev commented 1 year ago

https://github.com/KalinNonchev/gnomAD_DB/commit/ee03ef3a8867271f406650cd7bd183e5a2dc141b

KalinNonchev commented 1 year ago

The problem was resolved by switching from conda to mamba. condaforge/mambaforge