KamalakerDadi / benchmark_rsfMRI_prediction

Minimal scripts available for predictions on multiple datasets
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Cannot find the Image_ID in ADNI website #3

Open haojiang1 opened 4 years ago

haojiang1 commented 4 years ago

I coundn't find the csv file in ADNI website. Though some I found is relevent(include DX_Group but have no relevant Image_ID) Could you just email to me the csv above?

1024506972@qq.com
:)

samahit1 commented 4 years ago

any one get phenotype CSV files ? I am not able to identify the pheno type files for ADNI and HCP as well . Please help me to find those

KamalakerDadi commented 4 years ago

I don't know if you already have an account, you can request the access for both datasets at the below links.

http://adni.loni.usc.edu/data-samples/access-data/

and phenotypes inventory

http://adni.loni.usc.edu/data-samples/adni-data-inventory/

https://www.humanconnectome.org/study/hcp-young-adult/document/900-subjects-data-release

My co-authors in this paper did the job of downloading the data. I may not be much helpful here to guide in downloading data.

samahit1 commented 4 years ago

Thank you Sir. I did not see a way to contact the co-anthers. These phenotype files may be very small. if I get the email ID of others, I can contact them in case I find some difficulties on implementation.

Regards Samahit

On Sat, Jan 18, 2020 at 9:44 PM KamalakerDadi notifications@github.com wrote:

I don't know if you already have an account, you can request the access for both datasets at the below links.

  • ADNI

http://adni.loni.usc.edu/data-samples/access-data/

and phenotypes inventory

http://adni.loni.usc.edu/data-samples/adni-data-inventory/

  • HCP S900

https://www.humanconnectome.org/study/hcp-young-adult/document/900-subjects-data-release

My co-authors in this paper did the job of downloading the data.

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/KamalakerDadi/benchmark_rsfMRI_prediction/issues/3?email_source=notifications&email_token=AKHF6THDLZYQZJO4QEMEHK3Q6MTFLA5CNFSM4I56UEN2YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEJJ34OI#issuecomment-575913529, or unsubscribe https://github.com/notifications/unsubscribe-auth/AKHF6TFQBTKJ5STD2BP2BJTQ6MTFLANCNFSM4I56UENQ .

KamalakerDadi commented 4 years ago

I don't know if you already have an account, you can request the access for both datasets at the below links.

ADNI

http://adni.loni.usc.edu/data-samples/access-data/

and phenotypes inventory

http://adni.loni.usc.edu/data-samples/adni-data-inventory/

HCP S900

https://www.humanconnectome.org/study/hcp-young-adult/document/900-subjects-data-release

My co-authors in this paper did the job of downloading the data. I may not be much helpful here to guide in downloading data.

First, I would suggest you read the links to get to know the procedure about how to download the data. Downloading phenotypes should be reached by yourself to agree to the terms and conditions.

tailofcat commented 3 years ago

How to build the phenotype CSV files for 'run_prediction_on_adni.py'? In the ADNI website, I could not find the phenotypes information corresponding to the timeseries data downloaded by 'run_prediction_on_adni.py'. Because the ADNI subject IDs are in the form like 123_S_5678 while the timeseries filename is like 'I180734_timeseries.txt'.

How to access the information of the timeseries file 'I180734_timeseries.txt' from ADNI website?

xdjwolf commented 3 years ago

@tailofcat Can you leave me e-mail address, I'd like to discuss with you about the CSV files from 'run_prediction_on_adni.py'. Also, you can contact me at 1123098229@qq.com or langjw@mail.ustc.edu.cn.

haojiang1 commented 3 years ago

Hi, 

You can contact me through this email, I'll reply to u as soon as I could :)

Best regards, JIANG HAO

------------------ 原始邮件 ------------------ 发件人: "KamalakerDadi/benchmark_rsfMRI_prediction" @.>; 发送时间: 2021年7月9日(星期五) 下午5:27 @.>; @.**@.>; 主题: Re: [KamalakerDadi/benchmark_rsfMRI_prediction] Cannot find the Image_ID in ADNI website (#3)

@tailofcat Can you leave me e-mail address, I'd like to discuss with you about the CSV files from 'run_prediction_on_adni.py'. Also, you can contact me at @. or @.

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub, or unsubscribe.

SaqibMamoon commented 9 months ago

Hope this will help.

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