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KamilSJaron / genomic-features-of-parthenogenetic-animals

A project for gathering and re-analysing all published asexual genomes
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count coverage used for metaanalysis #5

Closed KamilSJaron closed 4 years ago

KamilSJaron commented 6 years ago

Something like 

find data/$*/trimmed_reads/ -name "*.fq.gz" -exec scripts/generic_genomics/fastq.gz2number_of_nt.sh {} \; > $@

Should do the job. It's easy, people might ask for it.

KamilSJaron commented 6 years ago

This will be better extracted from smudgeplots (no need of assumption of the genome size)