ctokheim
commented
6 months ago This might be a problem with the installed rpy2 being incompatible with the installed R. I would suggest re-installing R and rpy2 using consistent installation sources, as suggested by this post: https://github.com/conda-forge/conda-forge.github.io/issues/234
Type: <class 'ImportError'> Exception: libicuuc.so.54: cannot open shared object file: No such file or directory Traceback: File "/share/home/luoylLab/zengyuchen/biosoft/2020plus-1.2.3/2020plus.py", line 263, in
import src.classify.python.classifier
File "/share/home/luoylLab/zengyuchen/biosoft/2020plus-1.2.3/src/classify/python/classifier.py", line 3, in
from src.classify.python.r_random_forest_clf import RRandomForest
File "/share/home/luoylLab/zengyuchen/biosoft/2020plus-1.2.3/src/classify/python/r_random_forest_clf.py", line 4, in
import rpy2.robjects as ro
File "/share/home/luoylLab/zengyuchen/.conda/envs/2020plus/lib/python3.6/site-packages/rpy2/robjects/init.py", line 16, in
import rpy2.rinterface as rinterface
File "/share/home/luoylLab/zengyuchen/.conda/envs/2020plus/lib/python3.6/site-packages/rpy2/rinterface/init.py", line 92, in
from rpy2.rinterface._rinterface import (baseenv,
AN ERROR HAS OCCURRED: check the log file