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KarchinLab
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mhcnuggets
MHC Class I and Class II neoantigen binding prediction
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Tensorflow 2.16.1 compatibility
#38
Stikus
opened
3 months ago
1
Problem with importing the predict module
#37
fenghua0811
opened
1 year ago
4
Problem with importing the predict module
#36
fenghua0811
closed
1 year ago
1
Feature Request: add version.py, sync releases
#35
alina-bauer
opened
1 year ago
0
Improve how rank file name is determined
#34
susannasiebert
closed
1 year ago
4
Quay docker container doesn't work
#33
jonasscheid
closed
1 year ago
1
Request supplementary methods for HLA class II immunogenic mutation burden predicts response to immune checkpoint blockade
#32
xiw588
closed
1 year ago
4
Rank output
#31
XiaoshanShao
closed
1 year ago
0
Rank output
#30
XiaoshanShao
closed
2 years ago
0
Predict import fails after installation using pip
#29
christopher-mohr
closed
1 year ago
5
rank prediction with preliminary testing complete
#28
jhuan104
closed
2 years ago
0
`mhcnuggets.src.predict import predict` fails
#27
richelbilderbeek
closed
2 years ago
2
setup code modification (tensorflow or tensorflow-gpu)
#26
hmkim
closed
2 years ago
1
Can't install on Windows
#25
jracle85
closed
2 years ago
2
Bug with some alleles
#24
jracle85
closed
3 years ago
2
mhcnuggets scores on TESLA samples
#23
vladimirkovacevic
opened
3 years ago
4
Fixed find weighted optimal allele to consistently use shortened alle…
#22
jhuan104
closed
3 years ago
0
Change behaviour of the find_weighted_optimal_allele function.
#21
BrunoFant
closed
3 years ago
5
Add start of continuous integration
#20
richelbilderbeek
closed
3 years ago
1
Activate Travis CI
#19
richelbilderbeek
closed
4 years ago
5
Add stub of CI
#18
richelbilderbeek
closed
4 years ago
0
Feature request: allow for silent/verbose mode
#17
richelbilderbeek
opened
4 years ago
3
Feature request: use Python3
#16
richelbilderbeek
opened
4 years ago
1
Difference between haplotypes in code and in text file
#15
richelbilderbeek
closed
4 years ago
1
Feature request: add pytest
#14
richelbilderbeek
opened
4 years ago
0
Add stub of continuous integration
#13
richelbilderbeek
closed
3 years ago
1
Cannot import predict function
#12
richelbilderbeek
closed
4 years ago
4
Feature request: add continuous integration
#11
richelbilderbeek
opened
4 years ago
8
Tensorflow version
#10
Stikus
closed
4 months ago
1
Input format
#9
amomin-pact
opened
4 years ago
1
Closed prediction results file and redirected comments to stderr.
#8
skrakau
closed
4 years ago
1
Fix syntax error due to incorrect variable name
#7
susannasiebert
closed
4 years ago
1
Batch container
#6
aellini
closed
4 years ago
0
library version requirements
#5
jmerkin
closed
3 years ago
3
Use all alleles and peptides at once
#4
saskra
closed
3 years ago
2
Do not use colon in file names
#3
saskra
closed
4 years ago
1
Support for IEDB style of HLA naming?
#2
malachig
closed
6 years ago
10
Some small code changes to make MHCnuggets python3 compatible
#1
susannasiebert
closed
6 years ago
0