Closed Jeltje closed 8 months ago
gencodeOverlaps.py parses input manta and gridss vcf and runs overlaps with a genome annotation in bed format. It uses pyranges, which is a chromosome aware interval overlap tool.
gencodeOverlaps.py parses input manta and gridss vcf and runs overlaps with a genome annotation in bed format. It uses pyranges, which is a chromosome aware interval overlap tool.