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KarchinLab / open-cravat

A modular annotation tool for genomic variants
MIT License
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How to update Open-CRAVAT from v2.2.9 to v2.5.0 ? #231

Closed lmanchon closed 3 months ago

lmanchon commented 3 months ago

--Hi,

is there some command lines to update old version v2.2.9 to 2.5.0 ?

thank you --

kmoad commented 3 months ago

How to upgrade the core OpenCRAVAT software depends on how you installed. For most users installing through pip, you upgrade through pip.

pip install --upgrade open-cravat

Then you should upgrade the oc modules

oc module update

Instructions for other platforms are in our docs https://open-cravat.readthedocs.io/en/latest/Update-Instructions.html