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KarchinLab / open-cravat

A modular annotation tool for genomic variants
MIT License
110 stars 27 forks source link

Support for PhyloP30 and Phastcons30 #275

Open tkmamidi opened 2 weeks ago

tkmamidi commented 2 weeks ago

Hello,

Firstly, thanks for making this awesome tool!

I'm actively using OpenCRAVAT in my projects for more than a year now. When building an ML model, I was using PhyloP30 and Phastcons30 as features but seems like the current version of modules don't support this. I appreciate adding new datasets like Phastcons470 but can you also bring back previous modules/data?

image

Appreciate your help!

kmoad commented 6 days ago

Thanks for the suggestion. We'll add those to our list. Should take 2-3 weeks.