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KarrLab / datanator_rest_api

A OAS3 compliant REST API for the Datanator integrated database
MIT License
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Reactions kinetics endpoint with taxonomic distance calculations is down (500) #101

Closed jonrkarr closed 4 years ago

jonrkarr commented 4 years ago

https://testapi.datanator.info/reactions/kinlaw_by_rxn/?_from=0&size=1000&bound=loose&dof=0&substrates=YSYKRGRSMLTJNL-KFQCIAAJSA-N&products=PSXWNITXWWECNY-UCBTUHGZSA-N,XLYOFNOQVPJJNP-UHFFFAOYSA-N&taxon_distance=true&species=Escherichia%20coli

lzy7071 commented 4 years ago

Fixed, doesn't return an error now. (CommandCursor object, which is the obj returned by aggregate, is not JSON serializable.)

lzy7071 commented 4 years ago

I'm looking into why https://api.datanator.info/reactions/kinlaw_by_rxn/?_from=0&size=10&bound=loose&dof=0&substrates=YSYKRGRSMLTJNL-KFQCIAAJSA-N&products=PSXWNITXWWECNY-UCBTUHGZSA-N,XLYOFNOQVPJJNP-UHFFFAOYSA-N&taxon_distance=true&species=Escherichia%20coli stopped working. Seems related to AWS Elasticsearch Service.

lzy7071 commented 4 years ago

I'm looking into why https://api.datanator.info/reactions/kinlaw_by_rxn/?_from=0&size=10&bound=loose&dof=0&substrates=YSYKRGRSMLTJNL-KFQCIAAJSA-N&products=PSXWNITXWWECNY-UCBTUHGZSA-N,XLYOFNOQVPJJNP-UHFFFAOYSA-N&taxon_distance=true&species=Escherichia%20coli stopped working. Seems related to AWS Elasticsearch Service.

Fixed.