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KarrLab / datanator_rest_api

A OAS3 compliant REST API for the Datanator integrated database
MIT License
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Add OrthoDB ids for enzymes #123

Closed jonrkarr closed 4 years ago

jonrkarr commented 4 years ago

Previously reactions/kinlaw_by_rxn/ contained the KO id for each enzyme. We used this to provide links from reaction pages to pages with data about the enzyme.

This should now return the OrthoDB id for the enzyme

lzy7071 commented 4 years ago

Previously this was done via an aggregation pipeline. Collections are now in two databases so lookup can't be done. Temporarily fixed. Should add orthodb info to sabio_rk collection.

jonrkarr commented 4 years ago

This is less important to fix now. For now, this is basically commented out in the frontend.

lzy7071 commented 4 years ago

Opened issue in datanator repo.