Certain Reaction Queries Stopped Working

KarrLab / datanator_rest_api

A OAS3 compliant REST API for the Datanator integrated database

MIT License

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Certain Reaction Queries Stopped Working #47

Closed yosefdroth closed 4 years ago

yosefdroth commented 4 years ago

Some queries don't work anymore.

For example, the query for ATP + AMP -> ADP is https://api.datanator.info/proteins/proximity_abundance/proximity_abundance_kegg/?kegg_id=K00850&distance=100&depth=100&anchor=Escherichia coli

This does not seem to be working anymore

lzy7071 commented 4 years ago

/proteins has endpoints for protein queries. The link you pasted is working.

lzy7071 commented 4 years ago

You are right! I pasted the wrong link.

Here is the link that is not working: https://api.datanator.info/reactions/kinlaw_by_name/?substrates=ATP,AMP&products=ADP&_from=0&size=1000&bound=tight&taxon_distance=false

This link is also working. I would recommend changing size to a more reasonable number to improve performance. However, even with size set to 1000, the link is still working on my end.