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KarrLab
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wc_model_gen
Framework for systematically and scalably designing whole-cell models from large datasets
MIT License
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Reconcieve of wc-model-gen as workflow?
#17
jonrkarr
opened
5 years ago
0
Fix reaction modifier when degradose degrades
#16
szb37
opened
6 years ago
0
Implement tests that check model dynamics
#15
szb37
opened
6 years ago
0
Circular dependencies between prokaryote.MetabolismSubmodelGenerator and prokaryote.InitalizeModel
#14
artgoldberg
closed
6 years ago
1
Investigate protein degradation submodel OBO error
#13
szb37
closed
6 years ago
0
Investigate issue of assiging same tRNAs to two codons for non-reduced genetic codes (probabilistic error)
#12
szb37
opened
6 years ago
0
Automatically add repo metadata even if not in directory
#11
szb37
opened
6 years ago
0
include option for minimal genetic code
#10
szb37
closed
6 years ago
0
calculate mol weight of complexes
#9
szb37
closed
6 years ago
0
rate law gen: maximise inheritence
#8
szb37
closed
6 years ago
0
Support declaration of species concentration by compartment
#7
artgoldberg
opened
6 years ago
0
create class ObservablesGenerator
#6
artgoldberg
opened
6 years ago
0
Are the substrates and enzymes swapped in the Michaelis–Menten kinetics rate laws for RNA and protein degradation?
#5
artgoldberg
opened
6 years ago
1
speed up testing
#4
artgoldberg
opened
6 years ago
1
exp gene expression dynamics
#3
szb37
closed
6 years ago
0
Include Comprehensive tests
#2
bilalshaikh42
closed
3 years ago
0
Organize Tests
#1
bilalshaikh42
closed
6 years ago
1