search

KarrLab / wc_sim

A multi-algorithmic simulator for whole-cell models
MIT License
6 stars 2 forks source link

Improve validation with SBML test suite #79

Closed artgoldberg closed 4 years ago

artgoldberg commented 4 years ago
  1. add dashed lines to verification plots so that both expected and actual are visible, as used in plot_expected_vs_simulated()
  2. get 015 and 021 to verify
  3. clean up ode.py
  4. make skipped tests in test_verify.py work
  5. handle todos in test_verify.py
  6. retry DISCRETE_STOCHASTIC tests on failure, and decrease their run count
artgoldberg commented 4 years ago

1, 2, 3, 4 & 6 are done