Open rohan-uiuc opened 10 months ago
Thanks for opening a new issue! I'll now try to finish this implementation and open a PR for you to review. I'll comment if I get blocked or 'request your review' if I think I'm successful. So just watch for emails while I work. Please comment to give me additional instructions.
Experiment Type: RNA-Seq Sequencing of total cellular RNA
Workflow Management: Bash/SLURM Scripting and job scheduling
Software Stack: FastQC MultiQC STAR RSEM samtools DESeq2
What else to know about the pipeline? I am working PBMC samples collected from patients that are undergoing immunotherapy. Use the data files existing in Report_WholeBrain for execution tasks.